RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 IGLV3-27P01718 113 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 APRTP07741 180 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 EPCAMP16422 314 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 RBL1P28749 1068 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 HSPA9P38646 679 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 PBX2P40425 430 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 KCNQ1P51787 676 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ITGA8P53708 1063 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 PMS2P54278 862 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 GEMP55040 296 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ST8SIA6P61647 398 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 FAM193AP78312 1265 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 PITX1P78337 314 aaPredicted RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 CYP4F8P98187 520 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 SULT2A1Q06520 285 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 DHX9Q08211 1270 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 IL10RBQ08334 325 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 SLC20A2Q08357 652 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 PPIDQ08752 370 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 HNRNPDQ14103 355 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 DPYSQ14117 519 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 RFTN1Q14699 578 aaPredicted RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 SKIV2LQ15477 1246 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 TEAD2Q15562 447 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 TAZQ16635 292 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 HIF1AQ16665 826 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 SPDYCQ5MJ68 293 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ANKRD20A2Q5SQ80 823 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 RARS2Q5T160 578 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 MPP7Q5T2T1 576 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 LGSNQ5TDP6 509 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ANKRD20A1Q5TYW2 823 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ANKRD20A3Q5VUR7 823 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 DUPD1Q68J44 220 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 NCBP2-AS2Q69YL0 99 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 FBXL22Q6P050 247 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 CASC4Q6P4E1 433 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 NPNTQ6UXI9 565 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 TMC5Q6UXY8 1006 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 HTR3DQ70Z44 454 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 TRMT10CQ7L0Y3 403 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 BNIPLQ7Z465 357 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 TFAP2DQ7Z6R9 452 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 CPNE8Q86YQ8 564 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 MFN1Q8IWA4 741 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 HS6ST3Q8IZP7 471 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 UMODL1-AS1Q8N2C9 162 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 CPXM2Q8N436 756 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 EFHBQ8N7U6 833 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 KIAA1958Q8N8K9 716 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 SLC35B2Q8TB61 432 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 PYROXD1Q8WU10 500 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 SLC22A17Q8WUG5 538 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 UCMAQ8WVF2 138 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ART4Q93070 314 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 IFT43Q96FT9 208 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZNF599Q96NL3 588 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 NECTIN4Q96NY8 510 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 QKIQ96PU8 341 aaKnown RBP eCLIP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 HINFPQ9BQA5 517 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 NAT9Q9BTE0 207 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 CINPQ9BW66 212 aaPredicted RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 BBS2Q9BXC9 721 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 MAGEB5Q9BZ81 275 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 RNF38Q9H0F5 515 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 PRDM12Q9H4Q4 367 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 XAB2Q9HCS7 855 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ATP13A1Q9HD20 1204 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 GKN1Q9NS71 199 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 DTLQ9NZJ0 730 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 BFARQ9NZS9 450 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 MPP6Q9NZW5 540 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 TXNDC16Q9P2K2 825 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 DNMT3BQ9UBC3 853 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 DMGDHQ9UI17 866 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 XPO7Q9UIA9 1087 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 SLC25A13Q9UJS0 675 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 VPS28Q9UK41 221 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ARHGAP26Q9UNA1 814 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 SHOC2Q9UQ13 582 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 ATP8A1Q9Y2Q0 1164 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 YBX2Q9Y2T7 364 aaKnown RBP5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 FAM169AQ9Y6X4 670 aa5.98□□□□□ -1.45
RNU1-88P-201ENST00000459274 NUP210Q8TEM1 1887 aaPredicted RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 A0A0A0MRY4 1105 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ESYT3A0FGR9 886 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 MAGEB16A2A368 324 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 DRGXA6NNA5 263 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 RASA4BC9J798 803 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 LEFTY2O00292 366 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 DCLK1O15075 740 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 PFDN6O15212 129 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 MATN3O15232 486 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZBTB24O43167 697 aaPredicted RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 RASA4O43374 803 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 TSPAN3O60637 253 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 SPAG6O75602 509 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms