RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CATSPER4Q7RTX7 472 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 GALNT4Q8N4A0 578 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 RAB3IL1Q8TBN0 382 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 OSMRQ99650 979 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 ALDH1A2O94788 518 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 ZFXP17010 805 aaPredicted RBP20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 NR2C2P49116 596 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 PDCD2Q16342 344 aaPredicted RBP20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 SPATA16Q9BXB7 569 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 C20orf96Q9NUD7 363 aaPredicted RBP20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 SETD4Q9NVD3 440 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 APPL1Q9UKG1 709 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 KIAA1257Q9ULG3 409 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 SF3B1O75533 1304 aaKnown RBP eCLIP20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 BST2Q10589 180 aaKnown RBP20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 PDK3Q15120 406 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 SLC26A9Q7LBE3 791 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 EXOC8Q8IYI6 725 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 FBXW8Q8N3Y1 598 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 RNF169Q8NCN4 708 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 OLFM3Q96PB7 478 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 CDRT15Q96T59 188 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 OCEL1Q9H607 264 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 TASP1Q9H6P5 420 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 SHROOM3Q8TF72 1996 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 CCNT2O60583 730 aaKnown RBP20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 C2P06681 752 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 CYP2C8P10632 490 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 UQCRBP14927 111 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 FDFT1P37268 417 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 STEAP4Q687X5 459 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 ACTRT2Q8TDY3 377 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 OMDQ99983 421 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 GATA5Q9BWX5 397 aaPredicted RBP20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 TCF7L2Q9NQB0 619 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 VANGL2Q9ULK5 521 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 ARHGAP26Q9UNA1 814 aa20.01■□□□□ 0.79
CNEP1R1-203ENST00000458059 TMEM233B4DJY2 109 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 CNTFP26441 200 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 NUMBP49757 651 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 FOLH1Q04609 750 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 SH3D19Q5HYK7 790 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 ARMCX2Q7L311 632 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 PIP4K2CQ8TBX8 421 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 CELF6Q96J87 481 aaKnown RBP20■□□□□ 0.79
CNEP1R1-203ENST00000458059 CNBD2Q96M20 576 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 CDH19Q9H159 772 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 SNX25Q9H3E2 840 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 COPS7BQ9H9Q2 264 aaPredicted RBP20■□□□□ 0.79
CNEP1R1-203ENST00000458059 USP3Q9Y6I4 520 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 EEF2KO00418 725 aaKnown RBP20■□□□□ 0.79
CNEP1R1-203ENST00000458059 GRK2P25098 689 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 GARSP41250 739 aaKnown RBP20■□□□□ 0.79
CNEP1R1-203ENST00000458059 PTPN9P43378 593 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 BTKQ06187 659 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 ARHGAP1Q07960 439 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 SLC7A14Q8TBB6 771 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 MPHOSPH6Q99547 160 aaKnown RBP20■□□□□ 0.79
CNEP1R1-203ENST00000458059 RNF39Q9H2S5 420 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 ANLNQ9NQW6 1124 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 FZD10Q9ULW2 581 aa20■□□□□ 0.79
CNEP1R1-203ENST00000458059 ZBTB24O43167 697 aaPredicted RBP19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 RECQL4O94761 1208 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 XRCC1P18887 633 aaPredicted RBP19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 NAGLUP54802 743 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 PGM2L1Q6PCE3 622 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 IYDQ6PHW0 289 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 MTHFD1LQ6UB35 978 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 ACAD11Q709F0 780 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 CCNYL1Q8N7R7 359 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 ICA1LQ8NDH6 482 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 APBB2Q92870 758 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 RCN3Q96D15 328 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 TMA16Q96EY4 203 aaKnown RBP19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 DNAJC1Q96KC8 554 aaKnown RBP19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 CENPKQ9BS16 269 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 PIGVQ9NUD9 493 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 DNAJC28Q9NX36 388 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 DTNAQ9Y4J8 743 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 H3BNX3 289 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 THOP1P52888 689 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 BCAT1P54687 386 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 ANKRD52Q8NB46 1076 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 ZSCAN18Q8TBC5 510 aaPredicted RBP19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 URGCPQ8TCY9 931 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 ACMSDQ8TDX5 336 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 KBTBD7Q8WVZ9 684 aa19.99■□□□□ 0.79
CNEP1R1-203ENST00000458059 G3V2L1 256 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 H3BRB1 525 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 ALDH1A3P47895 512 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 ZNF772Q68DY9 489 aaPredicted RBP19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 RBBP8Q99708 897 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 APBA2Q99767 749 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 TUT1Q9H6E5 874 aaKnown RBP19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 NMRAL1Q9HBL8 299 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 PAPPA2Q9BXP8 1791 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 TRPA1O75762 1119 aa19.98■□□□□ 0.79
CNEP1R1-203ENST00000458059 PIGNO95427 931 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms