RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CYP2U1Q7Z449 544 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 FEM1AQ9BSK4 669 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 ZYG11BQ9C0D3 744 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 MKRN2Q9H000 416 aaKnown RBP23.84■■□□□ 1.41
CBX3-204ENST00000456948 OSBPL2Q9H1P3 480 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 MRPL47Q9HD33 250 aaKnown RBP23.84■■□□□ 1.41
CBX3-204ENST00000456948 ITM2CQ9NQX7 267 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 OR12D3Q9UGF7 316 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 VPS28Q9UK41 221 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 CYP8B1Q9UNU6 501 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 SCINQ9Y6U3 715 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 RHOCP08134 193 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 ZNF806P0C7X5 589 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 BCKDHBP21953 392 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 OR1E1P30953 314 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 GGCXP38435 758 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 MPLP40238 635 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 AIF1P55008 147 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 ARID5BQ14865 1188 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 HNRNPA1L2Q32P51 320 aaKnown RBP23.83■■□□□ 1.41
CBX3-204ENST00000456948 SCYL2Q6P3W7 929 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 APCDD1Q8J025 514 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 RMDN1Q96DB5 314 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 NCAPGQ9BPX3 1015 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 C2orf49Q9BVC5 232 aaPredicted RBP23.83■■□□□ 1.41
CBX3-204ENST00000456948 PPARGC1AQ9UBK2 798 aaKnown RBP23.83■■□□□ 1.41
CBX3-204ENST00000456948 SCML1Q9UN30 329 aa23.83■■□□□ 1.41
CBX3-204ENST00000456948 IGLV3-10A0A075B6K4 115 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 EDDM13A0A1B0GTR0 161 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 GJB6O95452 261 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 DNTTP04053 509 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 CD6P30203 668 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 NRG1Q02297 640 aaPredicted RBP23.82■■□□□ 1.4
CBX3-204ENST00000456948 TTC31Q49AM3 519 aaPredicted RBP23.82■■□□□ 1.4
CBX3-204ENST00000456948 EFHC2Q5JST6 749 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 SYCP2LQ5T4T6 812 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 LYSMD4Q5XG99 296 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 SPECC1LQ69YQ0 1117 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 CXorf57Q6NSI4 855 aaKnown RBP23.82■■□□□ 1.4
CBX3-204ENST00000456948 ZNF783Q6ZMS7 281 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 SLFN11Q7Z7L1 901 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 TMEFF1Q8IYR6 380 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 RNF214Q8ND24 703 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 FOXJ1Q92949 421 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 NTAN1Q96AB6 310 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 PRSS16Q9NQE7 514 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 ANLNQ9NQW6 1124 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 ZNHIT6Q9NWK9 470 aaKnown RBP23.82■■□□□ 1.4
CBX3-204ENST00000456948 TAS2R14Q9NYV8 317 aa23.82■■□□□ 1.4
CBX3-204ENST00000456948 CKAP5Q14008 2032 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 IGHV1OR15-9A0A0B4J2B8 117 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 BCLAF3A2AJT9 711 aaKnown RBP23.81■■□□□ 1.4
CBX3-204ENST00000456948 MZF1P28698 734 aaPredicted RBP23.81■■□□□ 1.4
CBX3-204ENST00000456948 COPAP53621 1224 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 HDAC4P56524 1084 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 MAMLD1Q13495 774 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 SH3PXD2AQ5TCZ1 1133 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 ZNF776Q68DI1 518 aaPredicted RBP23.81■■□□□ 1.4
CBX3-204ENST00000456948 PLEKHA7Q6IQ23 1121 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 PRR23CQ6ZRP0 262 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 RABEPKQ7Z6M1 372 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 ZNF366Q8N895 744 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 SLC6A17Q9H1V8 727 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 DONSONQ9NYP3 566 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 CNOT8Q9UFF9 292 aaKnown RBP23.81■■□□□ 1.4
CBX3-204ENST00000456948 ADAMTS1Q9UHI8 967 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 MBD1Q9UIS9 605 aaPredicted RBP23.81■■□□□ 1.4
CBX3-204ENST00000456948 NCKAP1Q9Y2A7 1128 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 DMXL1Q9Y485 3027 aa23.81■■□□□ 1.4
CBX3-204ENST00000456948 PLXND1Q9Y4D7 1925 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 TCRBV5S1A1TA0A578 114 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 DDX3XO00571 662 aaKnown RBP eCLIP23.8■■□□□ 1.44e-23■■□□□ 12.3
CBX3-204ENST00000456948 RNF8O76064 485 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 CNTN5O94779 1100 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 ETFBP38117 255 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 VASPP50552 380 aaPredicted RBP23.8■■□□□ 1.4
CBX3-204ENST00000456948 TPMTP51580 245 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 RPL7AP62424 266 aaKnown RBP23.8■■□□□ 1.4
CBX3-204ENST00000456948 RSPO4Q2I0M5 234 aaPredicted RBP23.8■■□□□ 1.4
CBX3-204ENST00000456948 ACCSLQ4AC99 568 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 ALFQ53S48 1182 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 PPP1R15BQ5SWA1 713 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 E4F1Q66K89 784 aaPredicted RBP23.8■■□□□ 1.4
CBX3-204ENST00000456948 RWDD4Q6NW29 188 aaKnown RBP23.8■■□□□ 1.4
CBX3-204ENST00000456948 TMC6Q7Z403 805 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 TFAP2DQ7Z6R9 452 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 DRC7Q8IY82 874 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 ZNF683Q8IZ20 524 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 PIGKQ92643 395 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 ZNF653Q96CK0 615 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 RPL10LQ96L21 214 aaKnown RBP23.8■■□□□ 1.4
CBX3-204ENST00000456948 MRGPRX3Q96LB0 322 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 PARD6AQ9NPB6 346 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 MPP6Q9NZW5 540 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 USP36Q9P275 1121 aaKnown RBP23.8■■□□□ 1.4
CBX3-204ENST00000456948 SNX10Q9Y5X0 201 aa23.8■■□□□ 1.4
CBX3-204ENST00000456948 ILVBLA1L0T0 632 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 I6L893 689 aaPredicted RBP23.79■■□□□ 1.4
CBX3-204ENST00000456948 KHNYNO15037 678 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms