RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 HDAC11Q96DB2 347 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 SMARCD1Q96GM5 515 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 CPNE1Q99829 537 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 LRRC40Q9H9A6 602 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 GYG2O15488 501 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 MTSS1O43312 755 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 ATP5BP06576 529 aaKnown RBP18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 AKR1A1P14550 325 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 MAGEA12P43365 314 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 ZNF135P52742 658 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 IRX4P78413 519 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 TEDDM1Q5T9Z0 273 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 TMEM135Q86UB9 458 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 TREML1Q86YW5 311 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 IFNL1Q8IU54 200 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 TRPV1Q8NER1 839 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 IRGQQ8WZA9 623 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 ISL2Q96A47 359 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 PAAF1Q9BRP4 392 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 MTG1Q9BT17 334 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 MLPHQ9BV36 600 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 RHOBTB2Q9BYZ6 727 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 GBA3Q9H227 469 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 IL1RAPL1Q9NZN1 696 aa18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-209ENST00000456560 A6NHS1 94 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 ERI2A8K979 691 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 H0Y3Z8 333 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 DUSP11O75319 330 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 ENTPD5O75356 428 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 PROCP04070 461 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 PCSK1P29120 753 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 SCNN1GP51170 649 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 RPL10AP62906 217 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 PDE1BQ01064 536 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 SATB1Q01826 763 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 UPP1Q16831 310 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 PM20D1Q6GTS8 502 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 GDF6Q6KF10 455 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 EDEM1Q92611 657 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 DPF3Q92784 378 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 ATP2A3Q93084 1043 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 AGAP3Q96P47 875 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 PGLYRP2Q96PD5 576 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 MARCOQ9UEW3 520 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 TRHDEQ9UKU6 1024 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 SNX10Q9Y5X0 201 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 CASTOR2A6NHX0 329 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 ITM2AO43736 263 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 AOC2O75106 756 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 USP12O75317 370 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 C6orf222P0C671 652 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 KITP10721 976 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 MX2P20592 715 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 HTRA3P83110 453 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 ZBTB17Q13105 803 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 PCLAFQ15004 111 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 PPM1JQ5JR12 505 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 FAM171BQ6P995 826 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 ZSCAN18Q8TBC5 510 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 MYLPFQ96A32 169 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 ZNF778Q96MU6 729 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 TKTL2Q9H0I9 626 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 WDCPQ9H6R7 721 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 BFARQ9NZS9 450 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 PPARGC1AQ9UBK2 798 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 ADAM28Q9UKQ2 775 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 VANGL2Q9ULK5 521 aa18.8■□□□□ 0.6
SEMA3B-209ENST00000456560 SCN10AQ9Y5Y9 1956 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 ZCWPW2A0A1B0GU75 182 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 LINGO3P0C6S8 592 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 GARSP41250 739 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 MGAT3Q09327 533 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 RSPH3Q86UC2 560 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 LMNTD2Q8IXW0 634 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 SCML4Q8N228 414 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 RBBP8Q99708 897 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 EPAS1Q99814 870 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 SIKE1Q9BRV8 207 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 CCDC106Q9BWC9 280 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 MMADHCQ9H3L0 296 aaPredicted RBP18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 OR12D3Q9UGF7 316 aa18.79■□□□□ 0.6
SEMA3B-209ENST00000456560 USP1O94782 785 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 CTSHP09668 335 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 ATP6V1C1P21283 382 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 ANKRD20A4Q4UJ75 823 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 GNASQ5JWF2 1037 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 PPP1R14CQ8TAE6 165 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 SOCS4Q8WXH5 440 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 ZNF669Q96BR6 464 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 VAT1Q99536 393 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 YIPF3Q9GZM5 350 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 TMEM216Q9P0N5 145 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 TXNDC16Q9P2K2 825 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 LYPLA1O75608 230 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 LRIG2O94898 1065 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 LMNAP02545 664 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 SERPINE1P05121 402 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms