RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 EPHA8P29322 1005 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 DRD3P35462 400 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 ABCG1P45844 678 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 RXRGP48443 463 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 METAP1P53582 386 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 PPP2CBP62714 309 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 PPP2CAP67775 309 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TARDBPQ13148 414 aaKnown RBP eCLIP12.8□□□□□ -0.362e-7■□□□□ 9.9
TRA2B-206ENST00000456380 ZC3H12AQ5D1E8 599 aaKnown RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 RAP1GAP2Q684P5 730 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 RRAGAQ7L523 313 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 SPATS2Q86XZ4 545 aaKnown RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 ARHGEF19Q8IW93 802 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 PIP4K2CQ8TBX8 421 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 FAM149B1Q96BN6 582 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 METTL14Q9HCE5 456 aaKnown RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 ARHGAP20Q9P2F6 1191 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 CEP83Q9Y592 693 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 PTPRQQ9UMZ3 2332 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TBC1D3DA0A087WVF3 549 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TBC1D3IA0A087WXS9 549 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TBC1D3EA0A087X179 549 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TBC1D3KA0A087X1G2 549 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TBC1D3FA6NER0 549 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TBC1D3LB9A6J9 549 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 YKT6O15498 198 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TLX3O43711 291 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TBC1D3HP0C7X1 549 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TACR2P21452 398 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 HNF1BP35680 557 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 EIF2S3P41091 472 aaKnown RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 ARRB1P49407 418 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 SEMG2Q02383 582 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 ELAVL3Q14576 367 aaKnown RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 C6orf118Q5T5N4 469 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 HES3Q5TGS1 186 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 SFMBT2Q5VUG0 894 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 RNF219Q5W0B1 726 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TBC1D3GQ6DHY5 549 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TBC1D3CQ6IPX1 549 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 FBXL19Q6PCT2 694 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 BEND5Q7L4P6 421 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 KANSL1Q7Z3B3 1105 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TBC1D3Q8IZP1 549 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 FAM131CQ96AQ9 280 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 NXPE2Q96DL1 559 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 ERVMER34-1Q9H9K5 563 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 ST7Q9NRC1 585 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 TJP2Q9UDY2 1190 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 ATP6V1DQ9Y5K8 247 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 SART1O43290 800 aaKnown RBP12.79□□□□□ -0.36
TRA2B-206ENST00000456380 IGLV3-25P01717 112 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 PITX1P78337 314 aaPredicted RBP12.79□□□□□ -0.36
TRA2B-206ENST00000456380 EIF4EBP2Q13542 120 aaPredicted RBP12.79□□□□□ -0.36
TRA2B-206ENST00000456380 RTP5Q14D33 572 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 DENND1BQ6P3S1 775 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 CHSY1Q86X52 802 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 CIR1Q86X95 450 aaPredicted RBP12.79□□□□□ -0.36
TRA2B-206ENST00000456380 MFSD2AQ8NA29 543 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 FRS2Q8WU20 508 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 BTN2A3PQ96KV6 586 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 KREMEN1Q96MU8 473 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 CYTH4Q9UIA0 394 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 SARDHQ9UL12 918 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 TPX2Q9ULW0 747 aaKnown RBP12.79□□□□□ -0.36
TRA2B-206ENST00000456380 AK5Q9Y6K8 562 aa12.79□□□□□ -0.36
TRA2B-206ENST00000456380 CAPN9O14815 690 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 RTN2O75298 545 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 SMC2O95347 1197 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 TRUB2O95900 331 aaKnown RBP12.78□□□□□ -0.36
TRA2B-206ENST00000456380 APOEP02649 317 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 PRB1P04280 392 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 CD44P16070 742 aaKnown RBP12.78□□□□□ -0.36
TRA2B-206ENST00000456380 PDGFRAP16234 1089 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 NNMTP40261 264 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 ACADSBP45954 432 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 GCNT1Q02742 428 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 SLC12A1Q13621 1099 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 NAPEPLDQ6IQ20 393 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 CCAR2Q8N163 923 aaKnown RBP12.78□□□□□ -0.36
TRA2B-206ENST00000456380 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 SMARCE1Q969G3 411 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 CEP63Q96MT8 703 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 SPAG5Q96R06 1193 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 UBL7Q96S82 380 aaPredicted RBP12.78□□□□□ -0.36
TRA2B-206ENST00000456380 PRMT1Q99873 361 aaKnown RBP12.78□□□□□ -0.36
TRA2B-206ENST00000456380 SLC4A5Q9BY07 1137 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 NRSN2Q9GZP1 204 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 PRORYQ9H606 182 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 POPDC2Q9HBU9 364 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 CNTN6Q9UQ52 1028 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 RAI2Q9Y5P3 530 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
TRA2B-206ENST00000456380 TP53BP1Q12888 1972 aaPredicted RBP12.78□□□□□ -0.36
TRA2B-206ENST00000456380 KCNU1A8MYU2 1149 aa12.77□□□□□ -0.36
TRA2B-206ENST00000456380 P4HA2O15460 535 aa12.77□□□□□ -0.36
TRA2B-206ENST00000456380 CKMT2P17540 419 aa12.77□□□□□ -0.36
TRA2B-206ENST00000456380 MAT2AP31153 395 aaKnown RBP12.77□□□□□ -0.36
TRA2B-206ENST00000456380 PLK1P53350 603 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms