RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ZNF33AQ06730 810 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 AP1B1Q10567 949 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 CA9Q16790 459 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 XKR4Q5GH76 650 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 PPP6R3Q5H9R7 873 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 C9orf57Q5W0N0 161 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 CAPRIN2Q6IMN6 1127 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 ALKAL1Q6UXT8 129 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 PACS1Q6VY07 963 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 BNIPLQ7Z465 357 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 ARID3BQ8IVW6 561 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 TOP6BLQ8N6T0 577 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 PDCD7Q8N8D1 485 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 OR6B3Q8NGW1 331 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 PPP1R14CQ8TAE6 165 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 ARNTL2Q8WYA1 636 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 NT5C3BQ969T7 300 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 PIWIL1Q96J94 861 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 PPP1R2P1Q96PQ5 205 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 KCTD15Q96SI1 283 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 VAT1Q99536 393 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 CPNE1Q99829 537 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 CCDC106Q9BWC9 280 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 NMUR2Q9GZQ4 415 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 VCX3BQ9H321 246 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 SNX25Q9H3E2 840 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 PLAC1Q9HBJ0 212 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 SMYD2Q9NRG4 433 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 MRGBPQ9NV56 204 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 PCMTD2Q9NV79 361 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 DTLQ9NZJ0 730 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 TXNDC16Q9P2K2 825 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 SOX13Q9UN79 622 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 NOD1Q9Y239 953 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 SSX2IPQ9Y2D8 614 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 MTCH2Q9Y6C9 303 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 B2RBV5 119 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 TMEM114B3SHH9 223 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 C9IYK1 514 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 SLC22A2O15244 555 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 MAP3K7O43318 606 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 AVILO75366 819 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 NPTXRO95502 500 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 VTNP04004 478 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 MPOP05164 745 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 MAGEA12P43365 314 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 CSE1LP55060 971 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 AP2B1P63010 937 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 XIAPP98170 497 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 GBE1Q04446 702 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 SCAPQ12770 1279 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 KPNB1Q14974 876 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 DGKDQ16760 1214 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 ACSBG2Q5FVE4 666 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 TMCO4Q5TGY1 634 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 SNX30Q5VWJ9 437 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 METTL21CQ5VZV1 264 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 LRRC74BQ6ZQY2 392 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 RINLQ6ZS11 566 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 CDHR3Q6ZTQ4 885 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 CATSPER4Q7RTX7 472 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 SPRED2Q7Z698 418 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 HERC6Q8IVU3 1022 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 SCUBE1Q8IWY4 988 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 TAB3Q8N5C8 712 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 COLGALT1Q8NBJ5 622 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 APPL2Q8NEU8 664 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 NR1H4Q96RI1 486 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 HNRNPABQ99729 332 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 OSBPL1AQ9BXW6 950 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 LRRC40Q9H9A6 602 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 FBXO6Q9NRD1 293 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 GPATCH2LQ9NWQ4 482 aa10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 PPARGC1AQ9UBK2 798 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-206ENST00000454704 NRCAMQ92823 1304 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 FAM237BA0A1B0GVD1 139 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 KPNA7A9QM74 516 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 PLIN3O60664 434 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 KPNA6O60684 536 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 ENTPD5O75356 428 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 GRAP2O75791 330 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 MMP3P08254 477 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 CALRP27797 417 aaKnown RBP10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 ADSLP30566 484 aaPredicted RBP10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 SPRP35270 261 aaPredicted RBP10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 GNL1P36915 607 aaPredicted RBP10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 POLD2P49005 469 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 SULT1E1P49888 294 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 SERPINB8P50452 374 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 CLCN2P51788 898 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 IRX1P78414 480 aaPredicted RBP10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 DEUP1Q05D60 604 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 BFSP2Q13515 415 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 RCN1Q15293 331 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 AAK1Q2M2I8 961 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 SOWAHAQ2M3V2 549 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 KHDC1Q4VXA5 237 aaKnown RBP10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 FASTKD1Q53R41 847 aaKnown RBP10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 FSCBQ5H9T9 825 aa10.83□□□□□ -0.68
GTF3C2-206ENST00000454704 MBLAC2Q68D91 279 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms