RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 TTC23Q5W5X9 447 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 PHF13Q86YI8 300 aaPredicted RBP12.26□□□□□ -0.45
SEC16A-207ENST00000453963 ADAM30Q9UKF2 790 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 A0A087X1B8 175 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 TRIM38O00635 465 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 HOXA2O43364 376 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 KPNA6O60684 536 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 VAPBO95292 243 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 EPB42P16452 691 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 ZNF618Q5T7W0 954 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 HGSNATQ68CP4 663 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 ARHGAP17Q68EM7 881 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 ZNF470Q6ECI4 717 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 ILDR2Q71H61 639 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 TTC7BQ86TV6 843 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 MIB1Q86YT6 1006 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 LZTR1Q8N653 840 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 C19orf18Q8NEA5 215 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 FBXO32Q969P5 355 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
SEC16A-207ENST00000453963 GLIS2Q9BZE0 524 aaPredicted RBP12.26□□□□□ -0.45
SEC16A-207ENST00000453963 CACNA2D2Q9NY47 1150 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 ATXN10Q9UBB4 475 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 ENOPH1Q9UHY7 261 aa12.26□□□□□ -0.45
SEC16A-207ENST00000453963 GSC2O15499 205 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 KRT6AP02538 564 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 KRT6BP04259 564 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 THP07101 528 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 MLNP12872 115 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 KRT6CP48668 564 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 LHX1P48742 406 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 ST13P50502 369 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 TKTL1P51854 596 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 DDX39BQ13838 428 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 SPANXN2Q5MJ10 180 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 FBXO47Q5MNV8 452 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 SLC30A10Q6XR72 485 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 PCDH20Q8N6Y1 951 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 LENG1Q96BZ8 264 aaPredicted RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 OSMRQ99650 979 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 APBA2Q99767 749 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 PIF1Q9H611 641 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 KRT84Q9NSB2 600 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 UTP6Q9NYH9 597 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 A0A0A0MRY4 1105 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 EGFRP00533 1210 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 HSMCR30P0CW71 290 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 PIK3R1P27986 724 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 CSE1LP55060 971 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 ACVR2BQ13705 512 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 BLMHQ13867 455 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 CES3Q6UWW8 571 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 RBM44Q6ZP01 1051 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 BNIPLQ7Z465 357 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 NT5DC4Q86YG4 428 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 KRT78Q8N1N4 520 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 ITFG1Q8TB96 612 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 MRPS31Q92665 395 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 KAT2BQ92831 832 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 SPATA13Q96N96 652 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 OSBPL11Q9BXB4 747 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 CEP41Q9BYV8 373 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 ROGDIQ9GZN7 287 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 ABHD16BQ9H3Z7 469 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 PNPLA3Q9NST1 481 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 STK39Q9UEW8 545 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 PCDHA11Q9Y5I1 949 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 MGRN1O60291 552 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 CBFA2T3O75081 653 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 WBP4O75554 376 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 UQCRBP14927 111 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 ITGALP20701 1170 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 ACAT1P24752 427 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 NEK3P51956 506 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 NAGLUP54802 743 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 PSME3P61289 254 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 TRAF3Q13114 568 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 EIF2B5Q13144 721 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 COL9A3Q14050 684 aaPredicted RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 SLC5A9Q2M3M2 681 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 GJC2Q5T442 439 aaPredicted RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 CLNKQ7Z7G1 428 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 C8orf59Q8N0T1 100 aaPredicted RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 FNDC5Q8NAU1 212 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 OR56A4Q8NGH8 313 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 UCMAQ8WVF2 138 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 PTCD3Q96EY7 689 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 MBOAT7Q96N66 472 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 OSBPL7Q9BZF2 842 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 NT5MQ9NPB1 228 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 LIMD1Q9UGP4 676 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 RSL24D1Q9UHA3 163 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 SESN1Q9Y6P5 492 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 ROBO3Q96MS0 1386 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 KCNK1O00180 336 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 HDAC3O15379 428 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 CD3EAPO15446 510 aaKnown RBP12.25□□□□□ -0.45
SEC16A-207ENST00000453963 HS6ST1O60243 411 aa12.25□□□□□ -0.45
SEC16A-207ENST00000453963 SLC2A4P14672 509 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms