RNA–Protein interactions for RNA: ENST00000453634.5

CHKB-CPT1B-202, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHKB-CPT1B, Length 2,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-202ENST00000453634 NR3C2P08235 984 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 PDGFRBP09619 1106 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 P4HA1P13674 534 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 ENO3P13929 434 aaPredicted RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 MSX2P35548 267 aaPredicted RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TCF7P36402 384 aaPredicted RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 MLH1P40692 756 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 RPL14P50914 215 aaKnown RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 PSMD7P51665 324 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 NAA20P61599 178 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 RHDQ02161 417 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 GSTM4Q03013 218 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 PTPN11Q06124 597 aaPredicted RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 NRF1Q16656 503 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 C15orf59Q2T9L4 293 aaPredicted RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 SEL1L3Q68CR1 1132 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 GPR141Q7Z602 305 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 CLEC14AQ86T13 490 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 FIBCD1Q8N539 461 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 SLX1AQ9BQ83 275 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 INIPQ9NRY2 104 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TXNDC16Q9P2K2 825 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 MID2Q9UJV3 735 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 CPSF3Q9UKF6 684 aaKnown RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 A0A087WXM4 84 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TCP10L2B9ZVM9 353 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 XPO1O14980 1071 aaKnown RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 HSPA1AP0DMV8 641 aaKnown RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 HSPA1BP0DMV9 641 aaKnown RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 PRKAA2P54646 552 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 OXCT1P55809 520 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TRAP1Q12931 704 aaKnown RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 BTG3Q14201 252 aaPredicted RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TRIM25Q14258 630 aaKnown RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 CCDC14Q49A88 953 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 CASC4Q6P4E1 433 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TNS4Q8IZW8 715 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 USP13Q92995 863 aaPredicted RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 ITPKCQ96DU7 683 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 DRC3Q9H069 523 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 WDR55Q9H6Y2 383 aaPredicted RBP11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 PFDN4Q9NQP4 134 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 ZNF358Q9NW07 568 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 OXSMQ9NWU1 459 aa11.42□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 GOLGA8QA0A0J9YX86 632 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 GOLGA8OA6NCC3 632 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 SOBPA7XYQ1 873 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 GOLGA8NF8WBI6 632 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 APOA4P06727 396 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 HOXC6P09630 235 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 SUPT20HL2P0C7V6 817 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TGFBIQ15582 683 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 SUPT20HL1Q3ZLR7 823 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TTC30AQ86WT1 665 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 ZNF420Q8TAQ5 688 aaPredicted RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 RDH11Q8TC12 318 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 LPAR1Q92633 364 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 CDHR1Q96JP9 859 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 DOK1Q99704 481 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 RBBP8Q99708 897 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 GATA5Q9BWX5 397 aaPredicted RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 NIFKQ9BYG3 293 aaKnown RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 NXF1Q9UBU9 619 aaKnown RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 MAFBQ9Y5Q3 323 aaPredicted RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TCAF2A6NFQ2 919 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 C9IYK1 514 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 GRID2O43424 1007 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 HTRA2O43464 458 aaPredicted RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 B4GALT4O60513 344 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 RGS20O76081 388 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 VAPBO95292 243 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TNNC2P02585 160 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TTKP33981 857 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 SPRP35270 261 aaPredicted RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 EFNA5P52803 228 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TFAMQ00059 246 aaKnown RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 NHSL2Q5HYW2 709 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 ITPRIPL1Q6GPH6 555 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 GRAMD4Q6IC98 578 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 PLD6Q8N2A8 252 aaKnown RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 DCLK2Q8N568 766 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 GRIN3AQ8TCU5 1115 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 ATP6V1E2Q96A05 226 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 C12orf43Q96C57 262 aaKnown RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TMEM176AQ96HP8 235 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 SNRNP25Q9BV90 132 aaKnown RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 MRPL4Q9BYD3 311 aaKnown RBP11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 PALMDQ9NP74 551 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 GTF2IRD1Q9UHL9 959 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TRIM64BA6NI03 449 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 STX16-NPEPL1H3BU86 382 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 M0QYV0 167 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 MSCO60682 206 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 OATP04181 439 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 POLBP06746 335 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 ASNSP08243 561 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 TFEBP19484 476 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 CYP2F1P24903 491 aa11.41□□□□□ -0.58
CHKB-CPT1B-202ENST00000453634 SLC7A1P30825 629 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms