RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CALCAP01258 141 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SERPINE1P05121 402 aa8.8□□□□□ -1
LSM5-208ENST00000450169 FYNP06241 537 aa8.8□□□□□ -1
LSM5-208ENST00000450169 TCN1P20061 433 aaPredicted RBP8.8□□□□□ -1
LSM5-208ENST00000450169 MYF6P23409 242 aa8.8□□□□□ -1
LSM5-208ENST00000450169 ECE1P42892 770 aa8.8□□□□□ -1
LSM5-208ENST00000450169 CLK3P49761 638 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 NLRP11P59045 1033 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 BASP1P80723 227 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 OCA2Q04671 838 aa8.8□□□□□ -1
LSM5-208ENST00000450169 NEDD8Q15843 81 aa8.8□□□□□ -1
LSM5-208ENST00000450169 INAVAQ3KP66 663 aa8.8□□□□□ -1
LSM5-208ENST00000450169 C1orf220Q5T0J3 134 aa8.8□□□□□ -1
LSM5-208ENST00000450169 TMTC4Q5T4D3 741 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SLC9A4Q6AI14 798 aa8.8□□□□□ -1
LSM5-208ENST00000450169 TRAF7Q6Q0C0 670 aa8.8□□□□□ -1
LSM5-208ENST00000450169 TMC5Q6UXY8 1006 aa8.8□□□□□ -1
LSM5-208ENST00000450169 PLEKHG7Q6ZR37 379 aa8.8□□□□□ -1
LSM5-208ENST00000450169 ZBTB49Q6ZSB9 765 aa8.8□□□□□ -1
LSM5-208ENST00000450169 PGAM4Q8N0Y7 254 aa8.8□□□□□ -1
LSM5-208ENST00000450169 ESX1Q8N693 406 aa8.8□□□□□ -1
LSM5-208ENST00000450169 ABHD11Q8NFV4 315 aa8.8□□□□□ -1
LSM5-208ENST00000450169 TRIB2Q92519 343 aa8.8□□□□□ -1
LSM5-208ENST00000450169 CFAP36Q96G28 342 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SH3YL1Q96HL8 342 aaPredicted RBP8.8□□□□□ -1
LSM5-208ENST00000450169 MBOAT7Q96N66 472 aa8.8□□□□□ -1
LSM5-208ENST00000450169 FIZ1Q96SL8 496 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SORT1Q99523 831 aa8.8□□□□□ -1
LSM5-208ENST00000450169 TUBA1CQ9BQE3 449 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SLC39A3Q9BRY0 314 aa8.8□□□□□ -1
LSM5-208ENST00000450169 MTG1Q9BT17 334 aaPredicted RBP8.8□□□□□ -1
LSM5-208ENST00000450169 WDR12Q9GZL7 423 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 PNPLA8Q9NP80 782 aa8.8□□□□□ -1
LSM5-208ENST00000450169 SCUBE2Q9NQ36 999 aa8.8□□□□□ -1
LSM5-208ENST00000450169 THG1LQ9NWX6 298 aaKnown RBP8.8□□□□□ -1
LSM5-208ENST00000450169 SEL1LQ9UBV2 794 aa8.8□□□□□ -1
LSM5-208ENST00000450169 MOSPD1Q9UJG1 213 aa8.8□□□□□ -1
LSM5-208ENST00000450169 ZNRF3Q9ULT6 936 aa8.8□□□□□ -1
LSM5-208ENST00000450169 NUP98P52948 1817 aa8.79□□□□□ -1
LSM5-208ENST00000450169 hCG_1818297A0A087WSY0 165 aa8.79□□□□□ -1
LSM5-208ENST00000450169 CYP3A7-CYP3A51PA0A087WV96 503 aa8.79□□□□□ -1
LSM5-208ENST00000450169 PNMA6FA0A0J9YX94 578 aa8.79□□□□□ -1
LSM5-208ENST00000450169 CXorf49A8MYA2 514 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 SCO2O43819 266 aa8.79□□□□□ -1
LSM5-208ENST00000450169 PPP1R11O60927 126 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 SEC24DO94855 1032 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 KCNH1O95259 989 aa8.79□□□□□ -1
LSM5-208ENST00000450169 STARD3NLO95772 234 aa8.79□□□□□ -1
LSM5-208ENST00000450169 GSRP00390 522 aa8.79□□□□□ -1
LSM5-208ENST00000450169 C1QAP02745 245 aa8.79□□□□□ -1
LSM5-208ENST00000450169 KRT5P13647 590 aa8.79□□□□□ -1
LSM5-208ENST00000450169 ENO3P13929 434 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 CD1EP15812 388 aa8.79□□□□□ -1
LSM5-208ENST00000450169 TCF4P15884 667 aa8.79□□□□□ -1
LSM5-208ENST00000450169 MATN1P21941 496 aa8.79□□□□□ -1
LSM5-208ENST00000450169 CYP3A7P24462 503 aa8.79□□□□□ -1
LSM5-208ENST00000450169 PIK3R1P27986 724 aa8.79□□□□□ -1
LSM5-208ENST00000450169 EEF1DP29692 281 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 GABRB2P47870 512 aa8.79□□□□□ -1
LSM5-208ENST00000450169 IST1P53990 364 aa8.79□□□□□ -1
LSM5-208ENST00000450169 PSMC5P62195 406 aa8.79□□□□□ -1
LSM5-208ENST00000450169 MAPRE1Q15691 268 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 PRR16Q569H4 304 aa8.79□□□□□ -1
LSM5-208ENST00000450169 TFDP3Q5H9I0 405 aa8.79□□□□□ -1
LSM5-208ENST00000450169 FAM182AQ5T1J6 154 aa8.79□□□□□ -1
LSM5-208ENST00000450169 LIN9Q5TKA1 542 aa8.79□□□□□ -1
LSM5-208ENST00000450169 CCSAPQ6IQ19 270 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 MON1BQ7L1V2 547 aa8.79□□□□□ -1
LSM5-208ENST00000450169 PTAR1Q7Z6K3 402 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 DCP2Q8IU60 420 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 TPH2Q8IWU9 490 aa8.79□□□□□ -1
LSM5-208ENST00000450169 ADGRF2Q8IZF7 708 aa8.79□□□□□ -1
LSM5-208ENST00000450169 SLC38A6Q8IZM9 456 aa8.79□□□□□ -1
LSM5-208ENST00000450169 RSAD2Q8WXG1 361 aa8.79□□□□□ -1
LSM5-208ENST00000450169 DHX38Q92620 1227 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 NACC1Q96RE7 527 aa8.79□□□□□ -1
LSM5-208ENST00000450169 RAD21L1Q9H4I0 556 aa8.79□□□□□ -1
LSM5-208ENST00000450169 PCIF1Q9H4Z3 704 aa8.79□□□□□ -1
LSM5-208ENST00000450169 WDR41Q9HAD4 459 aa8.79□□□□□ -1
LSM5-208ENST00000450169 MRPL47Q9HD33 250 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 SMOXQ9NWM0 555 aa8.79□□□□□ -1
LSM5-208ENST00000450169 KLQ9UEF7 1012 aa8.79□□□□□ -1
LSM5-208ENST00000450169 PSME2Q9UL46 239 aa8.79□□□□□ -1
LSM5-208ENST00000450169 SNED1Q8TER0 1413 aa8.79□□□□□ -1
LSM5-208ENST00000450169 PLIN4Q96Q06 1357 aa8.79□□□□□ -1
LSM5-208ENST00000450169 RGSL1A5PLK6 1076 aa8.79□□□□□ -1
LSM5-208ENST00000450169 FAM172BPA6NC97 362 aa8.79□□□□□ -1
LSM5-208ENST00000450169 STX16-NPEPL1H3BU86 382 aa8.79□□□□□ -1
LSM5-208ENST00000450169 SLC22A1O15245 554 aa8.79□□□□□ -1
LSM5-208ENST00000450169 TLR3O15455 904 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 CYP19A1P11511 503 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 PRKCAP17252 672 aa8.79□□□□□ -1
LSM5-208ENST00000450169 DPP6P42658 865 aa8.79□□□□□ -1
LSM5-208ENST00000450169 CSE1LP55060 971 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 PHC1P78364 1004 aa8.79□□□□□ -1
LSM5-208ENST00000450169 SLC10A2Q12908 348 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 MAMLD1Q13495 774 aa8.79□□□□□ -1
LSM5-208ENST00000450169 SWI5Q1ZZU3 235 aa8.79□□□□□ -1
LSM5-208ENST00000450169 TRIM71Q2Q1W2 868 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 ODR4Q5SWX8 454 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms