RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 N4BP2L1Q5TBK1 243 aaPredicted RBP17.48■□□□□ 0.39
CDKN1A-204ENST00000448526 ATG16L1Q676U5 607 aa17.48■□□□□ 0.39
CDKN1A-204ENST00000448526 RTN4RL1Q86UN2 441 aaPredicted RBP17.48■□□□□ 0.39
CDKN1A-204ENST00000448526 TRIM42Q8IWZ5 723 aa17.48■□□□□ 0.39
CDKN1A-204ENST00000448526 ACMSDQ8TDX5 336 aa17.48■□□□□ 0.39
CDKN1A-204ENST00000448526 AZIN2Q96A70 460 aa17.48■□□□□ 0.39
CDKN1A-204ENST00000448526 TEKT5Q96M29 485 aa17.48■□□□□ 0.39
CDKN1A-204ENST00000448526 BRD8Q9H0E9 1235 aa17.48■□□□□ 0.39
CDKN1A-204ENST00000448526 DSEQ9UL01 958 aa17.48■□□□□ 0.39
CDKN1A-204ENST00000448526 TMEM88BA6NKF7 163 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 VGLL3A8MV65 326 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 TRAFD1O14545 582 aaPredicted RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 TNFRSF10BO14763 440 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 BIRC5O15392 142 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 HAUS5O94927 633 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 PRKAR2AP13861 404 aaKnown RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 SERPINB6P35237 376 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 SLC5A3P53794 718 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 RWDD4Q6NW29 188 aaKnown RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 TMEM135Q86UB9 458 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 ALYREFQ86V81 257 aaKnown RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 CNTD1Q8N815 330 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 DNAAF3Q8N9W5 541 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 MFSD3Q96ES6 412 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 PTCD3Q96EY7 689 aaKnown RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 RAB3IPQ96QF0 476 aaPredicted RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 AGAP2Q99490 1192 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 OSBPL2Q9H1P3 480 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 LRRC40Q9H9A6 602 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 ARHGEF38Q9NXL2 777 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 SFMBT1Q9UHJ3 866 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 TRHDEQ9UKU6 1024 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 TLL2Q9Y6L7 1015 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 IRAK2O43187 625 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 MSI1O43347 362 aaKnown RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 ATP9BO43861 1147 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 TPH1P17752 444 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 ITGA7Q13683 1181 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 ANKRD20A4Q4UJ75 823 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 FASTKD1Q53R41 847 aaKnown RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 FAM26DQ5JW98 314 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 KYAT3Q6YP21 454 aaKnown RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 OTOP3Q7RTS5 596 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 SCD5Q86SK9 330 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 LONP2Q86WA8 852 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 ZNF280BQ86YH2 543 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 ARID3BQ8IVW6 561 aaPredicted RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 USP33Q8TEY7 942 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 CASP10Q92851 521 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 ZNF419Q96HQ0 510 aaPredicted RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 MIPEPQ99797 713 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 BFARQ9NZS9 450 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 MARCOQ9UEW3 520 aaPredicted RBP17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 LNPEPQ9UIQ6 1025 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 NUDT5Q9UKK9 219 aa17.47■□□□□ 0.39
CDKN1A-204ENST00000448526 E2F8A0AVK6 867 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 ARHGAP42A6NI28 874 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 MTSS1O43312 755 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 DDHD2O94830 711 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 KITP10721 976 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 SLC8A1P32418 973 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 GP5P40197 560 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 ZNF135P52742 658 aaPredicted RBP17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 RPL10AP62906 217 aaKnown RBP17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 ZBTB16Q05516 673 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 STXBP5Q5T5C0 1151 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 WLSQ5T9L3 541 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 ARHGAP12Q8IWW6 846 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 THEM5Q8N1Q8 247 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 UROC1Q96N76 676 aa17.46■□□□□ 0.39
CDKN1A-204ENST00000448526 FRMPD3Q5JV73 1810 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 PLIN3O60664 434 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 GLRA3O75311 464 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 CST5P28325 142 aaPredicted RBP17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 PTPN4P29074 926 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 ABCG1P45844 678 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 PDE1BQ01064 536 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 TSPY1Q01534 308 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 STX3Q13277 289 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 PREPLQ4J6C6 727 aaPredicted RBP17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 MBLAC2Q68D91 279 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 ATG14Q6ZNE5 492 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 CMC1Q7Z7K0 106 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 SPATA2LQ8IUW3 424 aaPredicted RBP17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 DCLK2Q8N568 766 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 FAM13CQ8NE31 585 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 ATXN7L3BQ96GX2 97 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 CPNE1Q99829 537 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 NMUR2Q9GZQ4 415 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 NMUR1Q9HB89 426 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 CHRAC1Q9NRG0 131 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 NDFIP2Q9NV92 336 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 ZNF358Q9NW07 568 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 NOD1Q9Y239 953 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 MYO16Q9Y6X6 1858 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 DFFAO00273 331 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 FCHO1O14526 889 aa17.45■□□□□ 0.38
CDKN1A-204ENST00000448526 ITM2AO43736 263 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms