RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 KRT34O76011 436 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 SKIP12755 728 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 CPA3P15088 417 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 ADRA1BP35368 520 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 ABCE1P61221 599 aaKnown RBP12.9□□□□□ -0.34
TRO-215ENST00000445561 HSP90AA5PQ58FG0 334 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 LDLRAD1Q5T700 205 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 C6orf163Q5TEZ5 329 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 FSTL4Q6MZW2 842 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 NAPRTQ6XQN6 538 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 LIMS2Q7Z4I7 341 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 ZNF467Q7Z7K2 595 aaPredicted RBP12.9□□□□□ -0.34
TRO-215ENST00000445561 SMG8Q8ND04 991 aaKnown RBP12.9□□□□□ -0.34
TRO-215ENST00000445561 CPNE1Q99829 537 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 NAT9Q9BTE0 207 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 CYP4F11Q9HBI6 524 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 TMEM30AQ9NV96 361 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 ZMPSTE24O75844 475 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 PDE5AO76074 875 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 KCNE1P15382 129 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 TPH1P17752 444 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 WARSP23381 471 aaKnown RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 EPHX2P34913 555 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 CCNHP51946 323 aaPredicted RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 CACNA2D1P54289 1103 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 EPHB1P54762 984 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 ZBTB17Q13105 803 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 SPANXN3Q5MJ09 141 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 PDPK2PQ6A1A2 396 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 MYLK4Q86YV6 388 aaPredicted RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 EFCAB3Q8N7B9 438 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRO-215ENST00000445561 SLC2A13Q96QE2 648 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 RBBP8Q99708 897 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 C1orf21Q9H246 121 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 WDR6Q9NNW5 1121 aaKnown RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 CCL15-CCL14A0A0B4J2E2 113 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 ZCWPW2A0A1B0GU75 182 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 MBLAC1A4D2B0 266 aaPredicted RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 ZNF195O14628 629 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 PTGESO14684 152 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 XPOTO43592 962 aaKnown RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 AP2A1O95782 977 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 F2P00734 622 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 USP17L7P0C7H9 530 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 NCAM1P13591 858 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 CD68P34810 354 aaPredicted RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 GARSP41250 739 aaKnown RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 AFF1P51825 1210 aaKnown RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 COPAP53621 1224 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 TPI1P60174 286 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 NAB1Q13506 487 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 GRB14Q14449 540 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 DBN1Q16643 649 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 CCL15Q16663 113 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 GRTP1Q5TC63 336 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 ZNF781Q8N8C0 355 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 PYDC1Q8WXC3 89 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 EDEM1Q92611 657 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 CCDC124Q96CT7 223 aaKnown RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 ZNF184Q99676 751 aaPredicted RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 SIKE1Q9BRV8 207 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 LRRC40Q9H9A6 602 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 CRTAC1Q9NQ79 661 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 CHRAC1Q9NRG0 131 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 CPSF2Q9P2I0 782 aaKnown RBP12.89□□□□□ -0.35
TRO-215ENST00000445561 ANGPTL2Q9UKU9 493 aa12.89□□□□□ -0.35
TRO-215ENST00000445561 DCXO43602 365 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 FAM200BP0CF97 657 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 MX2P20592 715 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 GRK2P25098 689 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 MFSD10Q14728 455 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 PPP2R5DQ14738 602 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 ANKRD20A4Q4UJ75 823 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 XKR4Q5GH76 650 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 IQSEC1Q6DN90 963 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 TWF2Q6IBS0 349 aaKnown RBP12.88□□□□□ -0.35
TRO-215ENST00000445561 IRGCQ6NXR0 463 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 TOP6BLQ8N6T0 577 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 MLPHQ9BV36 600 aaPredicted RBP12.88□□□□□ -0.35
TRO-215ENST00000445561 PPP1R12CQ9BZL4 782 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 DDIT4Q9NX09 232 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 DDX43Q9NXZ2 648 aaKnown RBP12.88□□□□□ -0.35
TRO-215ENST00000445561 SF3B1O75533 1304 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRO-215ENST00000445561 A0A096LPK6 155 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 E9PBE3 544 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 KLHL41O60662 606 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 KLHL2O95198 593 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 ATP5BP06576 529 aaKnown RBP12.88□□□□□ -0.35
TRO-215ENST00000445561 CD1EP15812 388 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 SAT1P21673 171 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 LIMK2P53671 638 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 AP2B1P63010 937 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 INSCQ1MX18 579 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 C9orf131Q5VYM1 1079 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 IZUMO2Q6UXV1 221 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 TMEM135Q86UB9 458 aa12.88□□□□□ -0.35
TRO-215ENST00000445561 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms