RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 PDE11AQ9HCR9 933 aa4.83□□□□□ -1.64
AC003001.1-201ENST00000443247 SPAG4Q9NPE6 437 aa4.83□□□□□ -1.64
AC003001.1-201ENST00000443247 NDUFAF4Q9P032 175 aa4.83□□□□□ -1.64
AC003001.1-201ENST00000443247 PKP3Q9Y446 797 aa4.83□□□□□ -1.64
AC003001.1-201ENST00000443247 TTC3P53804 2025 aa4.83□□□□□ -1.64
AC003001.1-201ENST00000443247 HMX3A6NHT5 357 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 KCNJ18B7U540 433 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 GRM8O00222 908 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 NEURL1O76050 574 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 PPATQ06203 517 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 PTGR1Q14914 329 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 ODF3L2Q3SX64 289 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 TUBB8Q3ZCM7 444 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 TANGO2Q6ICL3 276 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 ERAP2Q6P179 960 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 CCDC174Q6PII3 467 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 SYNE3Q6ZMZ3 975 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 BHLHA9Q7RTU4 235 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 TMEM200AQ86VY9 491 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 ENDOVQ8N8Q3 282 aaKnown RBP4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 OTUD7AQ8TE49 926 aaPredicted RBP4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 TRAPPC9Q96Q05 1148 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 PIGSQ96S52 555 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 HDHD5Q9BXW7 423 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 IL21RQ9HBE5 538 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 ARL15Q9NXU5 204 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 RCE1Q9Y256 329 aa4.82□□□□□ -1.64
AC003001.1-201ENST00000443247 INSIG1O15503 277 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 OAZ2O95190 189 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 CYP21A2P08686 494 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 PRPH2P23942 346 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 CHKAP35790 457 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 STAT1P42224 750 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 FOXG1P55316 489 aaPredicted RBP4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 CDK18Q07002 472 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 FOXO1Q12778 655 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 PDCLQ13371 301 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 OS9Q13438 667 aaPredicted RBP4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 TIGD6Q17RP2 521 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 ALG10Q5BKT4 473 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 ALG10BQ5I7T1 473 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 DAB2IPQ5VWQ8 1189 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 SLC30A9Q6PML9 568 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 CCDC25Q86WR0 208 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 ENAHQ8N8S7 591 aaPredicted RBP4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 FAM110DQ8TAY7 271 aaPredicted RBP4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 TMEM174Q8WUU8 243 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 NPAS1Q99742 590 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 ARHGAP39Q9C0H5 1083 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 ABHD16BQ9H3Z7 469 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 FZD3Q9NPG1 666 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 SLC25A13Q9UJS0 675 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 KCND3Q9UK17 655 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 BAG5Q9UL15 447 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 DTX4Q9Y2E6 619 aa4.81□□□□□ -1.64
AC003001.1-201ENST00000443247 H0Y3Z8 333 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 KCNAB3O43448 404 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 SNHG28P0DPA3 235 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 VEGFAP15692 232 aaPredicted RBP4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 CHRNA5P30532 468 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 RHAGQ02094 409 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 ZBTB16Q05516 673 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 GPR162Q16538 588 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 LRRC24Q50LG9 513 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 ENTPD8Q5MY95 495 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 C10orf62Q5T681 223 aaPredicted RBP4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 JMJD6Q6NYC1 403 aaPredicted RBP4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 ZNF549Q6P9A3 640 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 RINLQ6ZS11 566 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 RNF144BQ7Z419 303 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 KDELC2Q7Z4H8 507 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 TMEM217Q8N7C4 229 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 LPAR1Q92633 364 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 KCNJ9Q92806 393 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 ARRDC3Q96B67 414 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 DDX23Q9BUQ8 820 aaKnown RBP4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 FRMD8Q9BZ67 464 aaPredicted RBP4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 ZNF304Q9HCX3 659 aa4.8□□□□□ -1.64
AC003001.1-201ENST00000443247 TCRBV7S3A2A0A539 114 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 FAM90A20PA6NIJ5 464 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 NPIPB13A6NJU9 1138 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 NPIPB5A8MRT5 1133 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 NPIPB4C9JG80 1138 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 H0YGN5 161 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 IPO5O00410 1097 aaKnown RBP4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 LYL1P12980 280 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 HOXB9P17482 250 aaPredicted RBP4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 TBXAS1P24557 533 aaPredicted RBP4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 TRAPPC10P48553 1259 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 POLD2P49005 469 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 PRKAA2P54646 552 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 P2RX3P56373 397 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 C9orf47Q6ZRZ4 202 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 SYT13Q7L8C5 426 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 GPSM1Q86YR5 675 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 SAMD14Q8IZD0 417 aaPredicted RBP4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 VPS52Q8N1B4 723 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 PELI3Q8N2H9 469 aa4.79□□□□□ -1.64
AC003001.1-201ENST00000443247 ASB5Q8WWX0 329 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms