RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 LZTS3O60299 673 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-208ENST00000443046 MAGEC1O60732 1142 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 RHOBTB3O94955 611 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 LUC7L3O95232 432 aaKnown RBP14.89□□□□□ -0.03
HMGN1-208ENST00000443046 FYNP06241 537 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 GIMD1P0DJR0 217 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 RPL13P26373 211 aaKnown RBP14.89□□□□□ -0.03
HMGN1-208ENST00000443046 MXI1P50539 228 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 METAP1P53582 386 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 TBX4P57082 545 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 ERVPABLB-1P60509 514 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 ADAM9Q13443 819 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 ELAVL3Q14576 367 aaKnown RBP14.89□□□□□ -0.03
HMGN1-208ENST00000443046 TAF1BQ53T94 588 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-208ENST00000443046 MS4A13Q5J8X5 152 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 PMF1Q6P1K2 205 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-208ENST00000443046 PRPF39Q86UA1 669 aaKnown RBP14.89□□□□□ -0.03
HMGN1-208ENST00000443046 TRIM69Q86WT6 500 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 APCDD1Q8J025 514 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 LSMEM2Q8N112 164 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 CARNMT1Q8N4J0 409 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 OR4C6Q8NH72 309 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 SLC39A13Q96H72 371 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 DDX50Q9BQ39 737 aaKnown RBP14.89□□□□□ -0.03
HMGN1-208ENST00000443046 NUCKS1Q9H1E3 243 aaKnown RBP14.89□□□□□ -0.03
HMGN1-208ENST00000443046 CPNE5Q9HCH3 593 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 KIAA1257Q9ULG3 409 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 COQ4Q9Y3A0 265 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 PTPN13Q12923 2485 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 SDC3O75056 442 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 RTN2O75298 545 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 IL1BP01584 269 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 VDRP11473 427 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 CKMT1AP12532 417 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 C6P13671 934 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 LCP1P13796 627 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 DGKAP23743 735 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 LSSP48449 732 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 NNTQ13423 1086 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 CUL2Q13617 745 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 CDH18Q13634 790 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 DCAF6Q58WW2 860 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 ARHGAP40Q5TG30 622 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 LCLAT1Q6UWP7 414 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 GUF1Q8N442 669 aaKnown RBP14.88□□□□□ -0.03
HMGN1-208ENST00000443046 CLEC4CQ8WTT0 213 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 FRS2Q8WU20 508 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 RPL10LQ96L21 214 aaKnown RBP14.88□□□□□ -0.03
HMGN1-208ENST00000443046 DPH1Q9BZG8 443 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 ASCL3Q9NQ33 180 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 FOXD4L1Q9NU39 408 aa14.88□□□□□ -0.03
HMGN1-208ENST00000443046 TDRD6O60522 2096 aaKnown RBP14.88□□□□□ -0.03
HMGN1-208ENST00000443046 COL27A1Q8IZC6 1860 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-208ENST00000443046 TYW5A2RUC4 315 aaKnown RBP14.87□□□□□ -0.03
HMGN1-208ENST00000443046 OPA1O60313 960 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 MOCS3O95396 460 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 LTFP02788 710 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 MPOP05164 745 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 VAV1P15498 845 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 VASPP50552 380 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-208ENST00000443046 AGBL4Q5VU57 503 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 BROXQ5VW32 411 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 IGF2-ASQ6U949 168 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 CFAP52Q8N1V2 620 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 TMEM145Q8NBT3 493 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 TFAP2BQ92481 460 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 NAF1Q96HR8 494 aaKnown RBP14.87□□□□□ -0.03
HMGN1-208ENST00000443046 SPAG5Q96R06 1193 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 ZSWIM1Q9BR11 485 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 CLMPQ9H6B4 373 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 UCKL1Q9NWZ5 548 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 USP25Q9UHP3 1055 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 RCOR1Q9UKL0 485 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 SARDHQ9UL12 918 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 HPSEQ9Y251 543 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 TLR6Q9Y2C9 796 aa14.87□□□□□ -0.03
HMGN1-208ENST00000443046 FLNCQ14315 2725 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 LY6G6EA0A0G2JKS1 128 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 A0A1B0GVM2 712 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 PRAMEF26H0Y7S4 382 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 STX10O60499 249 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 RNGTTO60942 597 aaKnown RBP14.86□□□□□ -0.03
HMGN1-208ENST00000443046 GP1BAP07359 652 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 CD19P15391 556 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 MAT2AP31153 395 aaKnown RBP14.86□□□□□ -0.03
HMGN1-208ENST00000443046 RGS7P49802 495 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 STK19P49842 368 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-208ENST00000443046 PLK1P53350 603 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 GABREP78334 506 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 SKOR1P84550 965 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 SLC12A1Q13621 1099 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 LY6DQ14210 128 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 STAT4Q14765 748 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 EDRF1Q3B7T1 1238 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 CBWD6Q4V339 395 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 CBWD3Q5JTY5 395 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 CBWD5Q5RIA9 395 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 ATL3Q6DD88 541 aa14.86□□□□□ -0.03
HMGN1-208ENST00000443046 FAM181AQ8N9Y4 354 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms