RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CCDC40Q4G0X9 1142 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 VWA3BQ502W6 1294 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 UBXN11Q5T124 520 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 SFRP5Q5T4F7 317 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MEI1Q5TIA1 1274 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 ATF7IP2Q5U623 682 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 BROXQ5VW32 411 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 ANO7Q6IWH7 933 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 DPY19L2P1Q6NXN4 242 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 ZPBP2Q6X784 338 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 ANKS3Q6ZW76 656 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 HS2ST1Q7LGA3 356 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 TMPRSS12Q86WS5 348 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CREBRFQ8IUR6 639 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 FAM114A1Q8IWE2 563 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 FAM186BQ8IYM0 893 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 TCEAL8Q8IYN2 117 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 XXYLT1Q8NBI6 393 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 ZNF461Q8TAF7 563 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 OLIG1Q8TAK6 271 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 TTC8Q8TAM2 541 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 GOLGA5Q8TBA6 731 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 SETD7Q8WTS6 366 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 POMGNT1Q8WZA1 660 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 FGF11Q92914 225 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 UBE2FQ969M7 185 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 SLC35C1Q96A29 364 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CCDC51Q96ER9 411 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 BICD1Q96G01 975 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MRFAP1L1Q96HT8 127 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 COX4I2Q96KJ9 171 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 FAM213AQ9BRX8 229 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MRPL4Q9BYD3 311 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 ZDHHC5Q9C0B5 715 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MIR1-1HGQ9H1L0 117 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CDT1Q9H211 546 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CXCL16Q9H2A7 254 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 ZCCHC4Q9H5U6 513 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 SNTG2Q9NY99 539 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CGNQ9P2M7 1197 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MAGEC2Q9UBF1 373 aaPredicted RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MTRRQ9UBK8 725 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 KCNG1Q9UIX4 513 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 GIT1Q9Y2X7 761 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 PCDHB5Q9Y5E4 795 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 BACE2Q9Y5Z0 518 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CDY1Q9Y6F8 540 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MED13LQ71F56 2210 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CCDC168Q8NDH2 2452 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 APCP25054 2843 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 PTPRJQ12913 1337 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 A0A1B0GUA9 196 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 LRRIQ3A6PVS8 624 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 PLK4O00444 970 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 GFRA2O00451 464 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 N4BP3O15049 544 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 EPHB6O15197 1021 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 MAPK13O15264 365 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TLX3O43711 291 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TOM1L1O75674 476 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 GNA14O95837 355 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 CST3P01034 146 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 EGFP01133 1207 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 AFPP02771 609 aaKnown RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 ZNF883P0CG24 379 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 EPB41P11171 864 aaKnown RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 ATF2P15336 505 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 SCP2P22307 547 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 ABCD1P33897 745 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 ACTN2P35609 894 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 PSMC2P35998 433 aaKnown RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 ACOT2P49753 483 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 VAMP7P51809 220 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 APBA1Q02410 837 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TNK2Q07912 1038 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 CYP24A1Q07973 514 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 GOLGA8FQ08AF8 430 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 GOLGA8DPQ0D2H9 430 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 BFSP1Q12934 665 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TBX2Q13207 712 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TUSC3Q13454 348 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 NOLC1Q14978 699 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 PSMD6Q15008 389 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 PCBP1Q15365 356 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TEAD2Q15562 447 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 SMAD1Q15797 465 aaKnown RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 SNRNP35Q16560 246 aaKnown RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 KRTAP21-3Q3LHN1 58 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 ZNF568Q3ZCX4 644 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 CBWD6Q4V339 395 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 DCAF17Q5H9S7 520 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 CBWD3Q5JTY5 395 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 CBWD5Q5RIA9 395 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 SLFN12LQ6IEE8 588 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 TMC6Q7Z403 805 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 ARID3BQ8IVW6 561 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-206ENST00000441089 VSTM4Q8IW00 320 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 BRSK2Q8IWQ3 736 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 GPD1LQ8N335 351 aa5.06□□□□□ -1.6
PTPN4-206ENST00000441089 SPC24Q8NBT2 197 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms