RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 STK19P49842 368 aaPredicted RBP20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 CDR2Q01850 454 aa20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 SLC25A52Q3SY17 297 aa20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 LRRC31Q6UY01 552 aa20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 IGSF8Q969P0 613 aa20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 TBCBQ99426 244 aa20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 OMDQ99983 421 aa20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 PABPC3Q9H361 631 aaKnown RBP20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 SGK2Q9HBY8 427 aa20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 METTL5Q9NRN9 209 aaKnown RBP20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 TMEM51Q9NW97 253 aa20.45■□□□□ 0.86
SHROOM1-204ENST00000440118 TARSL2A2RTX5 802 aaKnown RBP20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 CLDN11O75508 207 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 FSBPO95073 299 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 CSRP1P21291 193 aaKnown RBP20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 MZF1P28698 734 aaPredicted RBP20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 TYRO3Q06418 890 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 GRIK2Q13002 908 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 CST6Q15828 149 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 ACCSLQ4AC99 568 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 OTUD1Q5VV17 481 aaPredicted RBP20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 TRIM72Q6ZMU5 477 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 MMAAQ8IVH4 418 aaKnown RBP20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 AOPEPQ8N6M6 819 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 OR2I1PQ8NGU4 316 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 DNASE2BQ8WZ79 361 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 MYO19Q96H55 970 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 C11orf70Q9BRQ4 267 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 C6orf106Q9H6K1 298 aaPredicted RBP20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 FBXL12Q9NXK8 326 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 LIMA1Q9UHB6 759 aaKnown RBP20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 SLCO3A1Q9UIG8 710 aa20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 NOCTQ9UK39 431 aaKnown RBP20.44■□□□□ 0.86
SHROOM1-204ENST00000440118 CHD8Q9HCK8 2581 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 GIPC1O14908 333 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 EPHB6O15197 1021 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 MID1O15344 667 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 RNASEH2AO75792 299 aaKnown RBP20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 ADCY5O95622 1261 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 RHOCP08134 193 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 CEACAM1P13688 526 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 TFE3P19532 575 aaPredicted RBP20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 RDXP35241 583 aaKnown RBP20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 FLT3P36888 993 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 NSFP46459 744 aaKnown RBP20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 CXCR3P49682 368 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 IRAK1P51617 712 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 JAM2P57087 298 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 C9orf64Q5T6V5 341 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 CXorf57Q6NSI4 855 aaKnown RBP20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 USP30Q70CQ3 517 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 CFAP57Q96MR6 1250 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 ZDHHC5Q9C0B5 715 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 ARHGEF38Q9NXL2 777 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 ANGPTL2Q9UKU9 493 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 SIK3Q9Y2K2 1263 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 ITIH6Q6UXX5 1313 aa20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 TP53BP1Q12888 1972 aaPredicted RBP20.43■□□□□ 0.86
SHROOM1-204ENST00000440118 A0A1W2PP55 124 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 ADH1BP00325 375 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 IL1BP01584 269 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 CDH4P55283 916 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 FMO1Q01740 532 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 ELAVL3Q14576 367 aaKnown RBP20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 ARID5BQ14865 1188 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 TEAD4Q15561 434 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 DSG4Q86SJ6 1040 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 C14orf80Q86SX3 495 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 STK40Q8N2I9 435 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 PGAP3Q96FM1 320 aaPredicted RBP20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 DOCK4Q8N1I0 1966 aa20.42■□□□□ 0.86
SHROOM1-204ENST00000440118 BNIP3LO60238 219 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 CER1O95813 267 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 SDC4P31431 198 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 SLC8A1P32418 973 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 AFF3P51826 1226 aaKnown RBP20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 PLK1P53350 603 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 ATP11AP98196 1134 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 FOXC1Q12948 553 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 CDO1Q16878 200 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 ANO6Q4KMQ2 910 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 ACBD5Q5T8D3 534 aaPredicted RBP20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 IL27RAQ6UWB1 636 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 ADAT2Q7Z6V5 191 aaKnown RBP20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 PHLDB2Q86SQ0 1253 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 FAM131BQ86XD5 332 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 EMC1Q8N766 993 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 SLC30A5Q8TAD4 765 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 CNTNAP3BQ96NU0 1288 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 FEM1AQ9BSK4 669 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 CNTNAP3Q9BZ76 1288 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 SNX10Q9Y5X0 201 aa20.41■□□□□ 0.86
SHROOM1-204ENST00000440118 LRRC72A6NJI9 287 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 SRGAP2O75044 1071 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 PLXNA2O75051 1894 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 CYP1A1P04798 512 aaPredicted RBP20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 KRT83P78385 493 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 ARL13BQ3SXY8 428 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 C6orf118Q5T5N4 469 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms