RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TMEM245Q9H330 911 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 CD248Q9HCU0 757 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 SPTLC3Q9NUV7 552 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 FAM86C1Q9NVL1 165 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 MPP6Q9NZW5 540 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 CTTNBP2NLQ9P2B4 639 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 ZNF212Q9UDV6 495 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 USP18Q9UMW8 372 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 OR51B4Q9Y5P0 310 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 R4GN57 208 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 MUC6Q6W4X9 2439 aa12.15□□□□□ -0.47
HSPG2-206ENST00000439717 TCRBV21S2A2A0A5A6 115 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 ILVBLA1L0T0 632 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 WASH3PC4AMC7 463 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 FAM72CH0Y354 149 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 LCA5LO95447 670 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 MZF1P28698 734 aaPredicted RBP12.14□□□□□ -0.47
HSPG2-206ENST00000439717 HOXC13P31276 330 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 CYLC1P35663 651 aaPredicted RBP12.14□□□□□ -0.47
HSPG2-206ENST00000439717 MAPKAPK2P49137 400 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 ZNF135P52742 658 aaPredicted RBP12.14□□□□□ -0.47
HSPG2-206ENST00000439717 SEMA3BQ13214 749 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 BOLA3Q53S33 107 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 FAM72AQ5TYM5 149 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 ANO7Q6IWH7 933 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 FAM72DQ6L9T8 149 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 RWDD4Q6NW29 188 aaKnown RBP12.14□□□□□ -0.47
HSPG2-206ENST00000439717 FAM72BQ86X60 149 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 RHOT2Q8IXI1 618 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 MDGA1Q8NFP4 955 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 FAM122AQ96E09 287 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 ALG14Q96F25 216 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 MUC3BQ9H195 1237 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 LUC7LQ9NQ29 371 aaKnown RBP12.14□□□□□ -0.47
HSPG2-206ENST00000439717 TMEM248Q9NWD8 314 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 DONSONQ9NYP3 566 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 SUN2Q9UH99 717 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 PCSK1NQ9UHG2 260 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 AP4E1Q9UPM8 1137 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 NEU3Q9UQ49 428 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 ERVW-1Q9UQF0 538 aa12.14□□□□□ -0.47
HSPG2-206ENST00000439717 FGF10O15520 208 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-206ENST00000439717 MTA2O94776 668 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 EPHX1P07099 455 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 PRKCHP24723 683 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 EPHB2P29323 1055 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 ETFBP38117 255 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 PLA2G5P39877 138 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 NNMTP40261 264 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 MAGEA1P43355 309 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 PXNP49023 591 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-206ENST00000439717 KRT83P78385 493 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 CAMK2GQ13555 558 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-206ENST00000439717 BYSLQ13895 437 aaKnown RBP12.13□□□□□ -0.47
HSPG2-206ENST00000439717 TCEAL1Q15170 157 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 SPA17Q15506 151 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 USP39Q53GS9 565 aaKnown RBP12.13□□□□□ -0.47
HSPG2-206ENST00000439717 KIAA1211LQ6NV74 962 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 CYP4V2Q6ZWL3 525 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-206ENST00000439717 TFAP2DQ7Z6R9 452 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 C11orf74Q86VG3 221 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 NLRP14Q86W24 1093 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 PYROXD2Q8N2H3 581 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 OR52K2Q8NGK3 314 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 HMGB4Q8WW32 186 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 GAB3Q8WWW8 586 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 BTBD6Q96KE9 485 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 MRGPRX3Q96LB0 322 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 PEBP4Q96S96 227 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 SNRNP25Q9BV90 132 aaKnown RBP12.13□□□□□ -0.47
HSPG2-206ENST00000439717 C2orf49Q9BVC5 232 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-206ENST00000439717 MAGEB5Q9BZ81 275 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 EPC1Q9H2F5 836 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 DHX35Q9H5Z1 703 aaKnown RBP12.13□□□□□ -0.47
HSPG2-206ENST00000439717 CATSPERBQ9H7T0 1116 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 FBRSQ9HAH7 460 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 BCCIPQ9P287 314 aaKnown RBP eCLIP12.13□□□□□ -0.47
HSPG2-206ENST00000439717 VPS28Q9UK41 221 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 RAD54BQ9Y620 910 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 ATG2BQ96BY7 2078 aa12.13□□□□□ -0.47
HSPG2-206ENST00000439717 CXorf51AA0A1B0GTR3 108 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 TARSL2A2RTX5 802 aaKnown RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 WASH4PA8MWX3 477 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 HRO43593 1189 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 CREB3O43889 395 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 RPP40O75818 363 aaKnown RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 PROSCO94903 275 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 C7P10643 843 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 GABRG2P18507 467 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 MAN1A1P33908 653 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 ARHGAP25P42331 645 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 CTSOP43234 321 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 HCAR3P49019 387 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 TPI1P60174 286 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 GNA12Q03113 381 aa12.12□□□□□ -0.47
HSPG2-206ENST00000439717 HADHQ16836 314 aaKnown RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 METTL3Q86U44 580 aaKnown RBP12.12□□□□□ -0.47
HSPG2-206ENST00000439717 PGBD3Q8N328 593 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms