RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 PLD6Q8N2A8 252 aaKnown RBP18.48■□□□□ 0.55
KCNC4-204ENST00000438661 SYTL5Q8TDW5 730 aaPredicted RBP18.48■□□□□ 0.55
KCNC4-204ENST00000438661 FAM32AQ9Y421 112 aaKnown RBP18.48■□□□□ 0.55
KCNC4-204ENST00000438661 BMXP51813 675 aa18.48■□□□□ 0.55
KCNC4-204ENST00000438661 TXNL4AP83876 142 aaKnown RBP18.48■□□□□ 0.55
KCNC4-204ENST00000438661 AARS2Q5JTZ9 985 aaKnown RBP18.48■□□□□ 0.55
KCNC4-204ENST00000438661 CPXM1Q96SM3 734 aa18.48■□□□□ 0.55
KCNC4-204ENST00000438661 MSTO1Q9BUK6 570 aa18.48■□□□□ 0.55
KCNC4-204ENST00000438661 HAPLN2Q9GZV7 340 aa18.48■□□□□ 0.55
KCNC4-204ENST00000438661 HIPK3Q9H422 1215 aa18.48■□□□□ 0.55
KCNC4-204ENST00000438661 ZNF70Q9UC06 446 aaPredicted RBP18.48■□□□□ 0.55
KCNC4-204ENST00000438661 CORINQ9Y5Q5 1042 aa18.48■□□□□ 0.55
KCNC4-204ENST00000438661 VAPBO95292 243 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 TRUB2O95900 331 aaKnown RBP18.47■□□□□ 0.55
KCNC4-204ENST00000438661 PRKCGP05129 697 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 ZNF182P17025 639 aaPredicted RBP18.47■□□□□ 0.55
KCNC4-204ENST00000438661 MX2P20592 715 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 LDLRAP1Q5SW96 308 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 NETO2Q8NC67 525 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 TBC1D15Q8TC07 691 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 TARS2Q9BW92 718 aaKnown RBP18.47■□□□□ 0.55
KCNC4-204ENST00000438661 LOXHD1Q8IVV2 1947 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 COL11A2P13942 1736 aaPredicted RBP18.47■□□□□ 0.55
KCNC4-204ENST00000438661 TIPRLO75663 272 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 ERVK-10P10266 1014 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 SAT1P21673 171 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 PGGT1BP53609 377 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 NEDD8Q15843 81 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 LAYNQ6UX15 382 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 CMASQ8NFW8 434 aaPredicted RBP18.47■□□□□ 0.55
KCNC4-204ENST00000438661 FAM151AQ8WW52 585 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 APBB2Q92870 758 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 DCPSQ96C86 337 aaKnown RBP18.47■□□□□ 0.55
KCNC4-204ENST00000438661 ZNF597Q96LX8 424 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 AGAP3Q96P47 875 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 VPS45Q9NRW7 570 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 GABBR1Q9UBS5 961 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 FIS1Q9Y3D6 152 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 HES2Q9Y543 173 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 PCDHA11Q9Y5I1 949 aa18.47■□□□□ 0.55
KCNC4-204ENST00000438661 GPC6Q9Y625 555 aaPredicted RBP18.47■□□□□ 0.55
KCNC4-204ENST00000438661 H3BMQ9 156 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 HTRA2O43464 458 aaPredicted RBP18.46■□□□□ 0.55
KCNC4-204ENST00000438661 TFE3P19532 575 aaPredicted RBP18.46■□□□□ 0.55
KCNC4-204ENST00000438661 POLR2BP30876 1174 aaKnown RBP18.46■□□□□ 0.55
KCNC4-204ENST00000438661 HARS2P49590 506 aaKnown RBP18.46■□□□□ 0.55
KCNC4-204ENST00000438661 RPS6P62753 249 aaKnown RBP18.46■□□□□ 0.55
KCNC4-204ENST00000438661 PMS2P3Q13401 168 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 ZBED5Q49AG3 693 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 HERC6Q8IVU3 1022 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 PQLC3Q8N755 202 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 PLD5Q8N7P1 536 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 COG8Q96MW5 612 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 SDCBP2Q9H190 292 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 CYP26B1Q9NR63 512 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 SACM1LQ9NTJ5 587 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 SFMBT1Q9UHJ3 866 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 SLC8A2Q9UPR5 921 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 LRRIQ4A6NIV6 560 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 TPST1O60507 370 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 LTFP02788 710 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 ZNF12P17014 697 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 RAP1GAPP47736 663 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 MCCD1P59942 119 aaPredicted RBP18.46■□□□□ 0.55
KCNC4-204ENST00000438661 PGM5Q15124 567 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 DLG2Q15700 870 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 NIPA1Q7RTP0 329 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 TMEM126BQ8IUX1 230 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 SNX31Q8N9S9 440 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 FAM110BQ8TC76 370 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 TMEM143Q96AN5 459 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 APBA2Q99767 749 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 ZNF341Q9BYN7 854 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 MTMR12Q9C0I1 747 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 RPF2Q9H7B2 306 aaKnown RBP18.46■□□□□ 0.55
KCNC4-204ENST00000438661 CAB39LQ9H9S4 337 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 TMED5Q9Y3A6 229 aa18.46■□□□□ 0.55
KCNC4-204ENST00000438661 WDR46O15213 610 aaKnown RBP18.45■□□□□ 0.54
KCNC4-204ENST00000438661 AKAP10O43572 662 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 PLA2G6O60733 806 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 EPHX2P34913 555 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 FAM102AQ5T9C2 384 aaPredicted RBP18.45■□□□□ 0.54
KCNC4-204ENST00000438661 LYSMD3Q7Z3D4 306 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 PGAM4Q8N0Y7 254 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 SLC15A4Q8N697 577 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 RP9Q8TA86 221 aaKnown RBP18.45■□□□□ 0.54
KCNC4-204ENST00000438661 DLG3Q92796 817 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 POLR3FQ9H1D9 316 aaPredicted RBP18.45■□□□□ 0.54
KCNC4-204ENST00000438661 DEFB129Q9H1M3 183 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 EFCAB1Q9HAE3 211 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 SEPT9Q9UHD8 586 aaPredicted RBP18.45■□□□□ 0.54
KCNC4-204ENST00000438661 PCDHB12Q9Y5F1 795 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.45■□□□□ 0.54
KCNC4-204ENST00000438661 A0A087WXM4 84 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 ACOT8O14734 319 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 NDUFB5O43674 189 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 RAD17O75943 681 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 LSM8O95777 96 aaKnown RBP18.45■□□□□ 0.54
KCNC4-204ENST00000438661 GLDCP23378 1020 aa18.45■□□□□ 0.54
KCNC4-204ENST00000438661 ZBTB33Q86T24 672 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms