RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 MRPL49Q13405 166 aaKnown RBP6.76□□□□□ -1.33
SPEN-202ENST00000438066 ORC2Q13416 577 aaPredicted RBP6.76□□□□□ -1.33
SPEN-202ENST00000438066 BOP1Q14137 746 aaKnown RBP6.76□□□□□ -1.33
SPEN-202ENST00000438066 NONOQ15233 471 aaKnown RBP eCLIP6.76□□□□□ -1.33
SPEN-202ENST00000438066 ZRSR1Q15695 479 aaKnown RBP6.76□□□□□ -1.33
SPEN-202ENST00000438066 MEA1Q16626 185 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 WDR45BQ5MNZ6 344 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 ARMC3Q5W041 872 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 ACAD10Q6JQN1 1059 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.76□□□□□ -1.33
SPEN-202ENST00000438066 GALNT5Q7Z7M9 940 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 FAM83AQ86UY5 434 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 SDCCAG3Q96C92 435 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 SLC46A1Q96NT5 459 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 MED15Q96RN5 788 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 VPS16Q9H269 839 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 VAT1LQ9HCJ6 419 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 DNMT3BQ9UBC3 853 aaKnown RBP6.76□□□□□ -1.33
SPEN-202ENST00000438066 SBF1O95248 1867 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 PARP14Q460N5 1801 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 BECN2A8MW95 431 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 TCP10L2B9ZVM9 353 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 E7EVH7 732 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 GOLGA6L19H0YKK7 550 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 PJA2O43164 708 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 STC2O76061 302 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 NDUFB10O96000 172 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 VIPP01282 170 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 GLI1P08151 1106 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 CHRM3P20309 590 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 SLC16A2P36021 539 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 MAN2A2P49641 1150 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 MMP14P50281 582 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 GPS1Q13098 491 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 TSTQ16762 297 aaKnown RBP6.76□□□□□ -1.33
SPEN-202ENST00000438066 FAM214AQ32MH5 1076 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 MANEALQ5VSG8 457 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 ATG16L1Q676U5 607 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 NFRKBQ6P4R8 1299 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 NEK8Q86SG6 692 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 REXO1L1PQ8IX06 675 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 TRIML1Q8N9V2 468 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 C7orf26Q96N11 449 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 SPATA25Q9BR10 227 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 HSD3B7Q9H2F3 369 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 IL23AQ9NPF7 189 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 KRT84Q9NSB2 600 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 ANKEF1Q9NU02 776 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 TMOD4Q9NZQ9 345 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 KCND3Q9UK17 655 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 MAN1B1Q9UKM7 699 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 TTLL3Q9Y4R7 772 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 CDY1Q9Y6F8 540 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 DOCK1Q14185 1865 aa6.76□□□□□ -1.33
SPEN-202ENST00000438066 RBBP6Q7Z6E9 1792 aaKnown RBP6.75□□□□□ -1.33
SPEN-202ENST00000438066 MYOCOSA0A1B0GUC4 107 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 A0A1W2PRG0 241 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 F5H0A9 414 aaPredicted RBP6.75□□□□□ -1.33
SPEN-202ENST00000438066 F5H6K3 240 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 DCLK1O15075 740 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 EDIL3O43854 480 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 NEMFO60524 1076 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 PTMAP06454 111 aaKnown RBP6.75□□□□□ -1.33
SPEN-202ENST00000438066 RPS12P25398 132 aaKnown RBP6.75□□□□□ -1.33
SPEN-202ENST00000438066 KRT20P35900 424 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 SLC1A4P43007 532 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 POLD2P49005 469 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 CLNS1AP54105 237 aaKnown RBP6.75□□□□□ -1.33
SPEN-202ENST00000438066 DRG2P55039 364 aaKnown RBP6.75□□□□□ -1.33
SPEN-202ENST00000438066 HGFACQ04756 655 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 KLRC3Q07444 240 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 KCNMA1Q12791 1236 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 USP10Q14694 798 aaKnown RBP6.75□□□□□ -1.33
SPEN-202ENST00000438066 R3HDM1Q15032 1099 aaKnown RBP6.75□□□□□ -1.33
SPEN-202ENST00000438066 QRICH1Q2TAL8 776 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 ZNF750Q32MQ0 723 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 SLFN13Q68D06 897 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 BBS12Q6ZW61 710 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 SYT13Q7L8C5 426 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 FITM2Q8N6M3 262 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 TBCKQ8TEA7 893 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 RSC1A1Q92681 617 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 DHX58Q96C10 678 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 PAGE5Q96GU1 130 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 AJUBAQ96IF1 538 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 PWWP2AQ96N64 755 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 SGPP1Q9BX95 441 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 TRIM5Q9C035 493 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 RNPEPQ9H4A4 650 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 FAM83DQ9H4H8 585 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 ACAD9Q9H845 621 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 NOD2Q9HC29 1040 aa6.75□□□□□ -1.33
SPEN-202ENST00000438066 B5MCH6 92 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 RGS10O43665 173 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 AHCYL1O43865 530 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 CCNT2O60583 730 aaKnown RBP6.74□□□□□ -1.33
SPEN-202ENST00000438066 ITGB1P05556 798 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 OR52Z1P0C646 297 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 MSNP26038 577 aaKnown RBP6.74□□□□□ -1.33
SPEN-202ENST00000438066 CSF2RBP32927 897 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms