RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 SUSD2Q9UGT4 822 aa22.81■■□□□ 1.24
SEMA3B-205ENST00000434030 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 TARSL2A2RTX5 802 aaKnown RBP22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 GNSP15586 552 aa22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 MMP8P22894 467 aa22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 STK19P49842 368 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 OXCT1P55809 520 aa22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 SULT2A1Q06520 285 aa22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 ZNF177Q13360 481 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 ANO6Q4KMQ2 910 aa22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 RNF219Q5W0B1 726 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 ARCQ7LC44 396 aa22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 BNIPLQ7Z465 357 aa22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 OR52K2Q8NGK3 314 aa22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 SLC30A5Q8TAD4 765 aa22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 ALG14Q96F25 216 aa22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 GTPBP2Q9BX10 602 aaKnown RBP22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 NAT10Q9H0A0 1025 aaKnown RBP22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 TP53BP1Q12888 1972 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-205ENST00000434030 TMEM131Q92545 1883 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 EDDM13A0A1B0GTR0 161 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 ARHGAP33O14559 1287 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 CLDN11O75508 207 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 UNGP13051 313 aaPredicted RBP22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 ATXN3P54252 364 aaPredicted RBP22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 CDH4P55283 916 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 N4BP2L1Q5TBK1 243 aaPredicted RBP22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 TRIM72Q6ZMU5 477 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 ZNF683Q8IZ20 524 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 PTPRN2Q92932 1015 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 CFAP57Q96MR6 1250 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 PPP1R9BQ96SB3 815 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 PCDHB18PQ96TA0 734 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 FEM1AQ9BSK4 669 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 BTBD1Q9H0C5 482 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 PCED1AQ9H1Q7 454 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 C6orf106Q9H6K1 298 aaPredicted RBP22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 METTL5Q9NRN9 209 aaKnown RBP22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 TMPRSS4Q9NRS4 437 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 PAXBP1Q9Y5B6 917 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 SNX10Q9Y5X0 201 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 PLXNA2O75051 1894 aa22.79■■□□□ 1.24
SEMA3B-205ENST00000434030 A0A1B0GTW7 788 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 RNASEH1O60930 286 aaKnown RBP22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 CNTN5O94779 1100 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 SYPP08247 313 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 NNMTP40261 264 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 TTC31Q49AM3 519 aaPredicted RBP22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 PSAPL1Q6NUJ1 521 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 CAVIN1Q6NZI2 390 aaKnown RBP22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 PHLDB2Q86SQ0 1253 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 EMC1Q8N766 993 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 C1orf74Q96LT6 269 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 FAM129BQ96TA1 746 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 BPIFA3Q9BQP9 254 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 C11orf70Q9BRQ4 267 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 MIR1-1HGQ9H1L0 117 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 PABPC3Q9H361 631 aaKnown RBP22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 EIF2B4Q9UI10 523 aaKnown RBP22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 SCML1Q9UN30 329 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 TBC1D30Q9Y2I9 924 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 OR51B4Q9Y5P0 310 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 DOCK9Q9BZ29 2069 aa22.78■■□□□ 1.24
SEMA3B-205ENST00000434030 GIPC1O14908 333 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 ENDOD1O94919 500 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 SEMA4FO95754 770 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 CSRP1P21291 193 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 NOVA1P51513 510 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 CST6Q15828 149 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 ALFQ53S48 1182 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 SH3PXD2AQ5TCZ1 1133 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 USP30Q70CQ3 517 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 MMAAQ8IVH4 418 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 ZCCHC9Q8N567 271 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 MINDY1Q8N5J2 469 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 SGK2Q9HBY8 427 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 NCKAP1Q9Y2A7 1128 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 CHD5Q8TDI0 1954 aa22.77■■□□□ 1.24
SEMA3B-205ENST00000434030 DRGXA6NNA5 263 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 MID1O15344 667 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 TEX33O43247 280 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 RDXP35241 583 aaKnown RBP22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 VASPP50552 380 aaPredicted RBP22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 PTP4A2Q12974 167 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 ARTNQ5T4W7 220 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 ACBD5Q5T8D3 534 aaPredicted RBP22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 STK40Q8N2I9 435 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 OR2I1PQ8NGU4 316 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 C1orf216Q8TAB5 229 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 FRS2Q8WU20 508 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 HAPLN3Q96S86 360 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 FBXL12Q9NXK8 326 aa22.76■■□□□ 1.23
SEMA3B-205ENST00000434030 SMTNL1A8MU46 457 aa22.75■■□□□ 1.23
SEMA3B-205ENST00000434030 BCAT2O15382 392 aaPredicted RBP22.75■■□□□ 1.23
SEMA3B-205ENST00000434030 OPHN1O60890 802 aa22.75■■□□□ 1.23
SEMA3B-205ENST00000434030 CEACAM1P13688 526 aa22.75■■□□□ 1.23
SEMA3B-205ENST00000434030 VAV1P15498 845 aa22.75■■□□□ 1.23
SEMA3B-205ENST00000434030 SLC8A1P32418 973 aa22.75■■□□□ 1.23
SEMA3B-205ENST00000434030 ATP11AP98196 1134 aa22.75■■□□□ 1.23
SEMA3B-205ENST00000434030 SEMA3BQ13214 749 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms