RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 A0A096LPK6 155 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 FCGR1AP12314 374 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 CCDC153Q494R4 210 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 KLHL24Q6TFL4 600 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 SOCS4Q8WXH5 440 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 PNMA5Q96PV4 448 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 CORO1BQ9BR76 489 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 EHD4Q9H223 541 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 VPS45Q9NRW7 570 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 PDP2Q9P2J9 529 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 TRPM1Q7Z4N2 1603 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 PFKPQ01813 784 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 ZSWIM7Q19AV6 140 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 ULBP1Q9BZM6 244 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 LOC102724159A0A0B4J2E5 919 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 BUD23O43709 281 aaKnown RBP15.66■□□□□ 0.1
PTPRF-206ENST00000429895 ABCG1P45844 678 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 TUFMP49411 452 aaKnown RBP15.66■□□□□ 0.1
PTPRF-206ENST00000429895 MAPK10P53779 464 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 GNA13Q14344 377 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 PWP2Q15269 919 aaKnown RBP15.66■□□□□ 0.1
PTPRF-206ENST00000429895 TRIQKQ629K1 86 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 SAMD3Q8N6K7 520 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 PANX3Q96QZ0 392 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 TRIT1Q9H3H1 467 aaKnown RBP15.66■□□□□ 0.1
PTPRF-206ENST00000429895 BPIFA1Q9NP55 256 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 OPTCQ9UBM4 332 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 SLC24A2Q9UI40 661 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 LYVE1Q9Y5Y7 322 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 ADGRB3O60242 1522 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 HMGCRP04035 888 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 SSTR1P30872 391 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 SCTRP47872 440 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 SCNN1GP51170 649 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 DHFR2Q86XF0 187 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 MYCBPAPQ8TBZ2 947 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 PROX1Q92786 737 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 CATSPERZQ9NTU4 200 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 PDE5AO76074 875 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 GP5P40197 560 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 SLC6A3Q01959 620 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 SLC44A4Q53GD3 710 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 RAP1GAP2Q684P5 730 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 R3HCC1LQ7Z5L2 792 aaKnown RBP15.66■□□□□ 0.1
PTPRF-206ENST00000429895 GPSM1Q86YR5 675 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 ENGASEQ8NFI3 743 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 ABHD16BQ9H3Z7 469 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 ADGRA3Q8IWK6 1321 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 FGRP09769 529 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 ERVK-9P63128 1117 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 PPP1R16AQ96I34 528 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 DIABLOQ9NR28 239 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 KBTBD4Q9NVX7 518 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 CCDC167Q9P0B6 97 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 PCDHA3Q9Y5H8 950 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 ZNF839A8K0R7 811 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 E5RJQ4 531 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 RGS14O43566 566 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 OR6B1O95007 311 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 SERPINA4P29622 427 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 HNRNPH1P31943 449 aaKnown RBP15.66■□□□□ 0.1
PTPRF-206ENST00000429895 POLR2LP62875 67 aaKnown RBP15.66■□□□□ 0.1
PTPRF-206ENST00000429895 ZNF268Q14587 947 aaPredicted RBP15.66■□□□□ 0.1
PTPRF-206ENST00000429895 PDZK1Q5T2W1 519 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 CES5AQ6NT32 575 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 EPS8L2Q9H6S3 715 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 ARHGAP28Q9P2N2 729 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 MSRAQ9UJ68 235 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 PXDNLA1KZ92 1463 aa15.66■□□□□ 0.1
PTPRF-206ENST00000429895 CRATP43155 626 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 KPNB1Q14974 876 aaKnown RBP15.65■□□□□ 0.1
PTPRF-206ENST00000429895 ZDHHC17Q8IUH5 632 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 POU5F2Q8N7G0 328 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 RRN3Q9NYV6 651 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 FAM86B1E9PN63 330 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 CCL23P55773 120 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 SCAIQ8N9R8 606 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 TCP10LQ8TDR4 215 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 OSCP1Q8WVF1 389 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 SLITRK2Q9H156 845 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 SEMA4AQ9H3S1 761 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 MARCH2Q9P0N8 246 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 VTI1BQ9UEU0 232 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 KRT33AO76009 404 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 CALCAP01258 141 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 TGFB3P10600 412 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 MYL12AP19105 171 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 RAET1GQ6H3X3 334 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 PRKD2Q9BZL6 878 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 POPDC2Q9HBU9 364 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 ARHGAP20Q9P2F6 1191 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 POLR1AO95602 1720 aaPredicted RBP15.65■□□□□ 0.1
PTPRF-206ENST00000429895 MYL12BO14950 172 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 RECQL4O94761 1208 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 SHMT1P34896 483 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 CTNNB1P35222 781 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 ARMC4Q5T2S8 1044 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 TRHDEQ9UKU6 1024 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 MYPNQ86TC9 1320 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 SERPINE1P05121 402 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms