RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ADGRE3Q9BY15 652 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 RNF26Q9BY78 433 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 TTYH1Q9H313 450 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 GHITMQ9H3K2 345 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 NRIP3Q9NQ35 241 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 TLR8Q9NR97 1041 aaKnown RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 FZD4Q9ULV1 537 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 C19orf53Q9UNZ5 99 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 DERAQ9Y315 318 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 RRP7AQ9Y3A4 280 aaKnown RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 ANKRD18BA2A2Z9 1011 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 PI4KAP2A4QPH2 592 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 CGB1A6NKQ9 187 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 SLC38A8A6NNN8 435 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 F5H0A9 414 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 M0QZQ0 153 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 CA12O43570 354 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 PTP4A3O75365 173 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 HEXIM1O94992 359 aaKnown RBP3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 CYP2D6P10635 497 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 DRD1P21728 446 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 DUSP1P28562 367 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 POLD2P49005 469 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 CCR9P51686 369 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 JAK3P52333 1124 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 POLE2P56282 527 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 GPC5P78333 572 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 SF3A3Q12874 501 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 SEMA3BQ13214 749 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 CSHL1Q14406 222 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 MFSD13AQ14CX5 517 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 AASDHQ4L235 1098 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 CC2D1BQ5T0F9 858 aaKnown RBP3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 UBAP2Q5T6F2 1119 aaKnown RBP3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 SNX30Q5VWJ9 437 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 FAM90A2PQ658T7 463 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 GRHL2Q6ISB3 625 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 ANO7Q6IWH7 933 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 MIS18BP1Q6P0N0 1132 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 ZNF66Q6ZN08 573 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 PIK3AP1Q6ZUJ8 805 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 B4GALNT4Q76KP1 1039 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 NEK8Q86SG6 692 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 NRSN1Q8IZ57 195 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 GALNT16Q8N428 558 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 LSMEM1Q8N8F7 131 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 GPATCH11Q8N954 259 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 ZNF398Q8TD17 642 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 SNRNP27Q8WVK2 155 aaKnown RBP3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 RSC1A1Q92681 617 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 STAMQ92783 540 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 C5orf34Q96MH7 638 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 LBHD1Q9BQE6 289 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 BRD8Q9H0E9 1235 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 BRF2Q9HAW0 419 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 PLEKHA2Q9HB19 425 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 PI4KBQ9UBF8 816 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 NAALADL1Q9UQQ1 740 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 PCDHB7Q9Y5E2 793 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 CYP46A1Q9Y6A2 500 aa3.27□□□□□ -1.89
HMGB1P9-201ENST00000429856 ZNF804BA4D1E1 1349 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 WDR17Q8IZU2 1322 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 SYNDIG1LA6NDD5 238 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 TTC34A8MYJ7 566 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 CLIC1O00299 241 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 DSCR3O14972 297 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 FYB1O15117 783 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 USP12O75317 370 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 SLC3A2P08195 630 aaKnown RBP3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 CPA1P15085 419 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 AKR1B1P15121 316 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 ATF7P17544 494 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 RPS6KB1P23443 525 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 GALNSP34059 522 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 PTGER1P34995 402 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 HOXD12P35452 270 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 ACTN2P35609 894 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 KRT20P35900 424 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 IGHMBP2P38935 993 aaKnown RBP3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 RBM5P52756 815 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 ZBED6P86452 979 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 BFSP2Q13515 415 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 CBFBQ13951 182 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 ZNF268Q14587 947 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 RPS6KA2Q15349 733 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 TBCEQ15813 527 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 PFKFB3Q16875 520 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 ALDH1L2Q3SY69 923 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 TMEM196Q5HYL7 178 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 WDR45BQ5MNZ6 344 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 CCDC144NLQ6NUI1 221 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 CRELD2Q6UXH1 353 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 RANBP10Q6VN20 620 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 R3HCC1LQ7Z5L2 792 aaKnown RBP3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 ZMIZ2Q8NF64 920 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 ADAMTS15Q8TE58 950 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 SLC22A17Q8WUG5 538 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 HMGB4Q8WW32 186 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 KTI12Q96EK9 354 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms