RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 ZDHHC9Q9Y397 364 aa13.55□□□□□ -0.24
HLA-F-219ENST00000429294 ITIH6Q6UXX5 1313 aa13.55□□□□□ -0.24
HLA-F-219ENST00000429294 TRIM49BA6NDI0 452 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 MED7O43513 233 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 GABBR2O75899 941 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 WNT1P04628 370 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 SLC2A3P11169 496 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 TACR2P21452 398 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 EPHA8P29322 1005 aaPredicted RBP13.54□□□□□ -0.24
HLA-F-219ENST00000429294 CTSOP43234 321 aaPredicted RBP13.54□□□□□ -0.24
HLA-F-219ENST00000429294 PMS1P54277 932 aaKnown RBP13.54□□□□□ -0.24
HLA-F-219ENST00000429294 ADPRHP54922 357 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 GCNT1Q02742 428 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 DNAJC3Q13217 504 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 ILKQ13418 452 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 KCNJ12Q14500 433 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 FAM46CQ5VWP2 391 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 RAP1GAP2Q684P5 730 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.54□□□□□ -0.24
HLA-F-219ENST00000429294 ATP6V0D2Q8N8Y2 350 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 MFSD2AQ8NA29 543 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 DHTKD1Q96HY7 919 aaPredicted RBP13.54□□□□□ -0.24
HLA-F-219ENST00000429294 RPL10LQ96L21 214 aaKnown RBP13.54□□□□□ -0.24
HLA-F-219ENST00000429294 SPAG5Q96R06 1193 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 MED15Q96RN5 788 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 FAM129BQ96TA1 746 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 KDM4CQ9H3R0 1056 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 ERVMER34-1Q9H9K5 563 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
HLA-F-219ENST00000429294 PTPRQQ9UMZ3 2332 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 BPTFQ12830 3046 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 A0A1W2PR77 199 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 RNF225M0QZC1 329 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-219ENST00000429294 SLC7A4O43246 635 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 FYNP06241 537 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 KRT5P13647 590 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 MZF1P28698 734 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-219ENST00000429294 RXRGP48443 463 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 NXPH1P58417 271 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 YWHAZP63104 245 aaKnown RBP13.53□□□□□ -0.24
HLA-F-219ENST00000429294 SEMG2Q02383 582 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 OVGP1Q12889 678 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 STAT4Q14765 748 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 HS1BP3Q53T59 392 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 ZC3H12AQ5D1E8 599 aaKnown RBP13.53□□□□□ -0.24
HLA-F-219ENST00000429294 RABGAP1LQ5R372 815 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 TTC39BQ5VTQ0 682 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-219ENST00000429294 NAPEPLDQ6IQ20 393 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 RRAGAQ7L523 313 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 TAC4Q86UU9 113 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 FMR1NBQ8N0W7 255 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-219ENST00000429294 AADATQ8N5Z0 425 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 PIP4K2CQ8TBX8 421 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 STK32AQ8WU08 396 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 OR8D1Q8WZ84 308 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 BAP1Q92560 729 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 RNF34Q969K3 372 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 UBL7Q96S82 380 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-219ENST00000429294 ZSWIM1Q9BR11 485 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 NRSN2Q9GZP1 204 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 EBF2Q9HAK2 575 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 POPDC2Q9HBU9 364 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.53□□□□□ -0.24
HLA-F-219ENST00000429294 DMTF1Q9Y222 760 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 KALRNO60229 2985 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 COL5A1P20908 1838 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-219ENST00000429294 PLXNA2O75051 1894 aa13.53□□□□□ -0.24
HLA-F-219ENST00000429294 ARID1BQ8NFD5 2236 aaPredicted RBP13.52□□□□□ -0.24
HLA-F-219ENST00000429294 KCNU1A8MYU2 1149 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 C1QTNF3-AMACRE9PGA6 284 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 LATO43561 262 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 TRUB2O95900 331 aaKnown RBP13.52□□□□□ -0.25
HLA-F-219ENST00000429294 PDGFRAP16234 1089 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 ZNF18P17022 549 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 CKMT2P17540 419 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 GPD2P43304 727 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 RPL34P49207 117 aaKnown RBP13.52□□□□□ -0.25
HLA-F-219ENST00000429294 ACADVLP49748 655 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 CDK17Q00537 523 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 CCDC15Q0P6D6 951 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 TARDBPQ13148 414 aaKnown RBP eCLIP13.52□□□□□ -0.25
HLA-F-219ENST00000429294 MTA1Q13330 715 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 ACCSLQ4AC99 568 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 HES3Q5TGS1 186 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 SYPL2Q5VXT5 272 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 IQCHQ86VS3 1027 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 APCDD1Q8J025 514 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 EHBP1Q8NDI1 1231 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 PTPRN2Q92932 1015 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 KAT5Q92993 513 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 MYEOVQ96EZ4 313 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 BBC3Q96PG8 261 aaPredicted RBP13.52□□□□□ -0.25
HLA-F-219ENST00000429294 THAP9Q9H5L6 903 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 SLC25A13Q9UJS0 675 aa13.52□□□□□ -0.25
HLA-F-219ENST00000429294 TP53BP1Q12888 1972 aaPredicted RBP13.52□□□□□ -0.25
HLA-F-219ENST00000429294 SETXQ7Z333 2677 aaKnown RBP13.51□□□□□ -0.25
HLA-F-219ENST00000429294 A0A1B0GVM2 712 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 BICDL2A1A5D9 508 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 TCAF2A6NFQ2 919 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 CBX4O00257 560 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms