RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TPD52L3Q96J77 140 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 POLR1BQ9H9Y6 1135 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 A1CFQ9NQ94 594 aaKnown RBP9.11□□□□□ -0.95
CTNND1-208ENST00000428599 UBA2Q9UBT2 640 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ZNF232Q9UNY5 417 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ADGRA3Q8IWK6 1321 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 GCATO75600 419 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 OR6B1O95007 311 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ANXA5P08758 320 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 CYP2F1P24903 491 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ESRP1Q6NXG1 681 aaKnown RBP9.11□□□□□ -0.95
CTNND1-208ENST00000428599 RPTNQ6XPR3 784 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 IKBIPQ70UQ0 350 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 EID3Q8N140 333 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 TRPM4Q8TD43 1214 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 THAP2Q9H0W7 228 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 SIGLEC1Q9BZZ2 1709 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 FAM86B1E9PN63 330 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ZNF862O60290 1169 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 SLC25A12O75746 678 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 FAM86B2P0C5J1 330 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 GHRP10912 638 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 HTR1BP28222 390 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 TKTP29401 623 aaKnown RBP9.1□□□□□ -0.95
CTNND1-208ENST00000428599 PTPN11Q06124 597 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-208ENST00000428599 TRIM25Q14258 630 aaKnown RBP9.1□□□□□ -0.95
CTNND1-208ENST00000428599 NDUFA5Q16718 116 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 PDZK1Q5T2W1 519 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 TFAP2DQ7Z6R9 452 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 OR2W6PQ8NHA6 318 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 TMC2Q8TDI7 906 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 RERGQ96A58 199 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-208ENST00000428599 MRIQ9BWK5 157 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 CELF4Q9BZC1 486 aaKnown RBP9.1□□□□□ -0.95
CTNND1-208ENST00000428599 PRRG4Q9BZD6 226 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 SUCOQ9UBS9 1254 aaKnown RBP9.1□□□□□ -0.95
CTNND1-208ENST00000428599 AGRPO00253 132 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 IRF6O14896 467 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 RGS14O43566 566 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 CPA3P15088 417 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 CRABP2P29373 138 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 MGAT5Q09328 741 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ACVR2BQ13705 512 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 NDUFAF6Q330K2 333 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ALKBH2Q6NS38 261 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 SLC27A1Q6PCB7 646 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 LENG9Q96B70 501 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 FAIM2Q9BWQ8 316 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 KLHL25Q9H0H3 589 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 BATF3Q9NR55 127 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 GPSM3Q9Y4H4 160 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 EIF3HO15372 352 aaKnown RBP eCLIP9.1□□□□□ -0.952e-7■■□□□ 12
CTNND1-208ENST00000428599 MSCO60682 206 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ATP6V1B1P15313 513 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ACADSP16219 412 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 BNC1Q01954 994 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 MCL1Q07820 350 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ZNF57Q68EA5 555 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-208ENST00000428599 STK40Q8N2I9 435 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ZFP28Q8NHY6 868 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 EDEM1Q92611 657 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 PHTF1Q9UMS5 762 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 DNAJC16Q9Y2G8 782 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 OR10H1Q9Y4A9 318 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 MYOM1P52179 1685 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 MAP3K6O95382 1288 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 GYPCP04921 128 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 IL6P05231 212 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 TSPAN19P0C672 248 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 RHAGQ02094 409 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 SLC39A12Q504Y0 691 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 GRTP1Q5TC63 336 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 MFSD7Q6UXD7 560 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 CCNI2Q6ZMN8 369 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-208ENST00000428599 SPOCD1Q6ZMY3 1216 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 RBM43Q6ZSC3 357 aaKnown RBP9.1□□□□□ -0.95
CTNND1-208ENST00000428599 CHPFQ8IZ52 775 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 SH2D3CQ8N5H7 860 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 FNDC5Q8NAU1 212 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 KLHL23Q8NBE8 558 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ZNF248Q8NDW4 579 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ANKS1AQ92625 1134 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ZNF558Q96NG5 402 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 CLCC1Q96S66 551 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 APOL4Q9BPW4 351 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 KBTBD4Q9NVX7 518 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 A0A0A6YYK5 440 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-208ENST00000428599 TRIM43BA6NCK2 446 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 AP3D1O14617 1153 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 OR10H2O60403 315 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 AVILO75366 819 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 ADCYAP1R1P41586 468 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 PTSQ03393 145 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 CAMK1Q14012 370 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 USP41Q3LFD5 358 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 C16orf59Q7L2K0 433 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 SLC26A11Q86WA9 606 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 OR52L1Q8NGH7 329 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 RXFP2Q8WXD0 754 aa9.1□□□□□ -0.95
CTNND1-208ENST00000428599 PGLYRP2Q96PD5 576 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms