RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TAF5Q15542 800 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 MEA1Q16626 185 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 ZC3H12AQ5D1E8 599 aaKnown RBP13.41□□□□□ -0.26
VRK3-203ENST00000424804 PITRM1Q5JRX3 1037 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 TAF3Q5VWG9 929 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 ZNF776Q68DI1 518 aaPredicted RBP13.41□□□□□ -0.26
VRK3-203ENST00000424804 LRSAM1Q6UWE0 723 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 USP30Q70CQ3 517 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 TMPRSS7Q7RTY8 843 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 SLC47A2Q86VL8 602 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 MARCH9Q86YJ5 346 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 KDM1BQ8NB78 822 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 HJURPQ8NCD3 748 aaPredicted RBP13.41□□□□□ -0.26
VRK3-203ENST00000424804 PTPRN2Q92932 1015 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 NEUROG2Q9H2A3 272 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 SGK2Q9HBY8 427 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 NLRC4Q9NPP4 1024 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 LIMA1Q9UHB6 759 aaKnown RBP13.41□□□□□ -0.26
VRK3-203ENST00000424804 ERVW-1Q9UQF0 538 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 PCDHB9Q9Y5E1 797 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 KCNU1A8MYU2 1149 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 E5RJQ4 531 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 CAPN9O14815 690 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 MID1O15344 667 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 FSBPO95073 299 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 LUC7L3O95232 432 aaKnown RBP13.4□□□□□ -0.26
VRK3-203ENST00000424804 DNTTP04053 509 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 ATP1A3P13637 1013 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 TACR2P21452 398 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 CLCN1P35523 988 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 ACADSBP45954 432 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 ZNF165P49910 485 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 POLR2FP61218 127 aaKnown RBP13.4□□□□□ -0.26
VRK3-203ENST00000424804 CAMK2BQ13554 666 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 NCAPHQ15003 741 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 ARTNQ5T4W7 220 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 KIAA0895LQ68EN5 471 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 DHX40Q8IX18 779 aaKnown RBP13.4□□□□□ -0.26
VRK3-203ENST00000424804 CARNMT1Q8N4J0 409 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 AADATQ8N5Z0 425 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 C1orf131Q8NDD1 294 aaKnown RBP13.4□□□□□ -0.26
VRK3-203ENST00000424804 NEK11Q8NG66 645 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 RHBDD1Q8TEB9 315 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 SETD7Q8WTS6 366 aaKnown RBP13.4□□□□□ -0.26
VRK3-203ENST00000424804 FAM131CQ96AQ9 280 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 ALG14Q96F25 216 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 SERPINB11Q96P15 392 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 SPAG5Q96R06 1193 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 SYNCQ9H7C4 482 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 ADAMTS1Q9UHI8 967 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 CEP83Q9Y592 693 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 LOC400499M0QZD8 3231 aa13.4□□□□□ -0.26
VRK3-203ENST00000424804 URB1O60287 2271 aaKnown RBP13.39□□□□□ -0.27
VRK3-203ENST00000424804 FASNP49327 2511 aaKnown RBP13.39□□□□□ -0.27
VRK3-203ENST00000424804 IGSF10Q6WRI0 2623 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 A0A1W2PPC4 97 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 A0A1W2PR77 199 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 TARSL2A2RTX5 802 aaKnown RBP13.39□□□□□ -0.27
VRK3-203ENST00000424804 LGALS16A8MUM7 142 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 FLRT2O43155 660 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 PCDHGA12O60330 932 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 GFPT2O94808 682 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 ASLP04424 464 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 SRPRAP08240 638 aaKnown RBP13.39□□□□□ -0.27
VRK3-203ENST00000424804 RDXP35241 583 aaKnown RBP13.39□□□□□ -0.27
VRK3-203ENST00000424804 PLK1P53350 603 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 BPIFB4P59827 614 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 PDCLQ13371 301 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 CST6Q15828 149 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 RAP1GAP2Q684P5 730 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 DPY19L2P1Q6NXN4 242 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 LGI2Q8N0V4 545 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 OR52K2Q8NGK3 314 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 FRS2Q8WU20 508 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 SNX19Q92543 992 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 IGSF8Q969P0 613 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 NOX5Q96PH1 765 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 STK33Q9BYT3 514 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 FBXL12Q9NXK8 326 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 SCML1Q9UN30 329 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 APOBEC2Q9Y235 224 aaKnown RBP13.39□□□□□ -0.27
VRK3-203ENST00000424804 GPSM3Q9Y4H4 160 aa13.39□□□□□ -0.27
VRK3-203ENST00000424804 A0A1W2PP55 124 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 F8VZ95 297 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 VILLO15195 856 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 TRUB2O95900 331 aaKnown RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 MOCS2O96007 188 aaPredicted RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 VAV1P15498 845 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 CYP11B1P15538 503 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 ZNF18P17022 549 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 MZF1P28698 734 aaPredicted RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 SLC8A1P32418 973 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 DRD3P35462 400 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 STK19P49842 368 aaPredicted RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 IRAK1P51617 712 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 METAP1P53582 386 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 YWHAZP63104 245 aaKnown RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 ECT2LQ008S8 904 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 PRAMEF14Q5SWL7 426 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 OR6B2Q6IFH4 312 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms