RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 EPC1Q9H2F5 836 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 ANLNQ9NQW6 1124 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 TRMT1Q9NXH9 659 aaKnown RBP9.96□□□□□ -0.82
HERC3-204ENST00000422770 SLC25A13Q9UJS0 675 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 HCN2Q9UL51 889 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 CYP8B1Q9UNU6 501 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 PPP2R2CQ9Y2T4 447 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 ADGRG1Q9Y653 693 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 SCINQ9Y6U3 715 aa9.96□□□□□ -0.82
HERC3-204ENST00000422770 CCDC163A0A0D9SF12 145 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 A0A1W2PQF6 199 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 USP27XA6NNY8 438 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 CREB3O43889 395 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 BNIP3LO60238 219 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 CLDN11O75508 207 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 CNTN5O94779 1100 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 ASLP04424 464 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 DLDP09622 509 aaKnown RBP9.95□□□□□ -0.82
HERC3-204ENST00000422770 MYBL1P10243 752 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 ACADMP11310 421 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 GZMAP12544 262 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 MZF1P28698 734 aaPredicted RBP9.95□□□□□ -0.82
HERC3-204ENST00000422770 OR1E1P30953 314 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 HOXA6P31267 233 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 NNMTP40261 264 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 CTSOP43234 321 aaPredicted RBP9.95□□□□□ -0.82
HERC3-204ENST00000422770 MAGEA1P43355 309 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 DHPSP49366 369 aaPredicted RBP9.95□□□□□ -0.82
HERC3-204ENST00000422770 VAV2P52735 878 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 ZNF143P52747 638 aaPredicted RBP9.95□□□□□ -0.82
HERC3-204ENST00000422770 CDH4P55283 916 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 OXCT1P55809 520 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 KRT83P78385 493 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 MAMLD1Q13495 774 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 ASTE1Q2TB18 679 aaPredicted RBP9.95□□□□□ -0.82
HERC3-204ENST00000422770 PLEKHG6Q3KR16 790 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 ACCSLQ4AC99 568 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 LAIR1Q6GTX8 287 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 ARMCX6Q7L4S7 300 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 STRADAQ7RTN6 431 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 SLFN11Q7Z7L1 901 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 FAM124AQ86V42 546 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 ZSCAN30Q86W11 494 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 ZNF354CQ86Y25 554 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 APCDD1Q8J025 514 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 DCLK2Q8N568 766 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 FAM160A2Q8N612 972 aaPredicted RBP9.95□□□□□ -0.82
HERC3-204ENST00000422770 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.95□□□□□ -0.82
HERC3-204ENST00000422770 SUMF1Q8NBK3 374 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 CTNNBL1Q8WYA6 563 aaPredicted RBP9.95□□□□□ -0.82
HERC3-204ENST00000422770 VCPIP1Q96JH7 1222 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 RPL10LQ96L21 214 aaKnown RBP9.95□□□□□ -0.82
HERC3-204ENST00000422770 GABRG3Q99928 467 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 CNPY3Q9BT09 278 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 MTG2Q9H4K7 406 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 PRDM16Q9HAZ2 1276 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 MRPL47Q9HD33 250 aaKnown RBP9.95□□□□□ -0.82
HERC3-204ENST00000422770 TMEM51Q9NW97 253 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 OR12D3Q9UGF7 316 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 EBF1Q9UH73 591 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 USP18Q9UMW8 372 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 NENFQ9UMX5 172 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 TFR2Q9UP52 801 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 ERVW-1Q9UQF0 538 aa9.95□□□□□ -0.82
HERC3-204ENST00000422770 A0A0U1RQJ8 604 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 I6L893 689 aaPredicted RBP9.94□□□□□ -0.82
HERC3-204ENST00000422770 ZSCAN12O43309 604 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 NDUFS2O75306 463 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 RNF8O76064 485 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 H2AFZP0C0S5 128 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 CHRM1P11229 460 aaPredicted RBP9.94□□□□□ -0.82
HERC3-204ENST00000422770 ADRA1BP35368 520 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 SSR1P43307 286 aaKnown RBP9.94□□□□□ -0.82
HERC3-204ENST00000422770 STK19P49842 368 aaPredicted RBP9.94□□□□□ -0.82
HERC3-204ENST00000422770 HDAC4P56524 1084 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 ECT2LQ008S8 904 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 OGDHQ02218 1023 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 SPEM2Q0P670 501 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 BYSLQ13895 437 aaKnown RBP9.94□□□□□ -0.82
HERC3-204ENST00000422770 CCDC6Q16204 474 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 ALFQ53S48 1182 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 ACBD5Q5T8D3 534 aaPredicted RBP9.94□□□□□ -0.82
HERC3-204ENST00000422770 PLEKHA7Q6IQ23 1121 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 H2AFVQ71UI9 128 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 RASSF3Q86WH2 238 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 KIAA2013Q8IYS2 634 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 TXLNBQ8N3L3 684 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 DEFB119Q8N690 84 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 GANCQ8TET4 914 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 RUBCNQ92622 972 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 PRCCQ92733 491 aaPredicted RBP9.94□□□□□ -0.82
HERC3-204ENST00000422770 TBC1D31Q96DN5 1066 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 SIPA1Q96FS4 1042 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 HAPLN3Q96S86 360 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 SPON2Q9BUD6 331 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 TRIM7Q9C029 511 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 ZYG11BQ9C0D3 744 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 THAP2Q9H0W7 228 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 LZTFL1Q9NQ48 299 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 GPATCH2LQ9NWQ4 482 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms