RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ATP11AP98196 1134 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 SULT2A1Q06520 285 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 SKOR2Q2VWA4 1001 aaPredicted RBP22.56■■□□□ 1.2
TRAF4-204ENST00000422344 TRNP1Q6NT89 227 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 PHF13Q86YI8 300 aaPredicted RBP22.56■■□□□ 1.2
TRAF4-204ENST00000422344 APCDD1Q8J025 514 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 KDM1BQ8NB78 822 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 FOXJ1Q92949 421 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 TOE1Q96GM8 510 aaKnown RBP22.56■■□□□ 1.2
TRAF4-204ENST00000422344 HSPA12BQ96MM6 686 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 SELENOOQ9BVL4 669 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 ATXN2Q99700 1313 aaKnown RBP22.56■■□□□ 1.2
TRAF4-204ENST00000422344 ASCC3Q8N3C0 2202 aaKnown RBP22.55■■□□□ 1.2
TRAF4-204ENST00000422344 A0A1B0GTH6 734 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 GOLGA6L19H0YKK7 550 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 CDX4O14627 284 aaPredicted RBP22.55■■□□□ 1.2
TRAF4-204ENST00000422344 KRT3P12035 628 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 SPINK2P20155 84 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 ITPKAP23677 461 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 CTSOP43234 321 aaPredicted RBP22.55■■□□□ 1.2
TRAF4-204ENST00000422344 CDH4P55283 916 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 IRX4P78413 519 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 CDO1Q16878 200 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 UAP1L1Q3KQV9 507 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 SYCP2LQ5T4T6 812 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 UNQ6494/PRO21346Q6UXR6 183 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 C14orf80Q86SX3 495 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 LUZP1Q86V48 1076 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 FAM131BQ86XD5 332 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 RXFP2Q8WXD0 754 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 MRGPRX3Q96LB0 322 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 NUP58Q9BVL2 599 aa22.55■■□□□ 1.2
TRAF4-204ENST00000422344 NUSAP1Q9BXS6 441 aaKnown RBP22.55■■□□□ 1.2
TRAF4-204ENST00000422344 ANKRD62A6NC57 917 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 RNASEH1O60930 286 aaKnown RBP22.54■■□□□ 1.2
TRAF4-204ENST00000422344 DNTTP04053 509 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 MZF1P28698 734 aaPredicted RBP22.54■■□□□ 1.2
TRAF4-204ENST00000422344 HOXD12P35452 270 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 IRAK1P51617 712 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 ZBTB16Q05516 673 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 ASIC2Q16515 512 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 HNRNPA1L2Q32P51 320 aaKnown RBP22.54■■□□□ 1.2
TRAF4-204ENST00000422344 ARL13BQ3SXY8 428 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 TTC31Q49AM3 519 aaPredicted RBP22.54■■□□□ 1.2
TRAF4-204ENST00000422344 TRIM61Q5EBN2 209 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 ZNF776Q68DI1 518 aaPredicted RBP22.54■■□□□ 1.2
TRAF4-204ENST00000422344 CXorf57Q6NSI4 855 aaKnown RBP22.54■■□□□ 1.2
TRAF4-204ENST00000422344 LRSAM1Q6UWE0 723 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 RABEPKQ7Z6M1 372 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 RGL4Q8IZJ4 473 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 MYO19Q96H55 970 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 C1orf74Q96LT6 269 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 NAP1L5Q96NT1 182 aaPredicted RBP22.54■■□□□ 1.2
TRAF4-204ENST00000422344 GPR174Q9BXC1 333 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 MTG2Q9H4K7 406 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 ANLNQ9NQW6 1124 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 WSB2Q9NYS7 404 aaPredicted RBP22.54■■□□□ 1.2
TRAF4-204ENST00000422344 VPS28Q9UK41 221 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 PILRBQ9UKJ0 227 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 SNX10Q9Y5X0 201 aa22.54■■□□□ 1.2
TRAF4-204ENST00000422344 AKAP13Q12802 2813 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 EDDM13A0A1B0GTR0 161 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 LRRC53A6NM62 1247 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 MEI4A8MW99 385 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 TOP3BO95985 862 aaKnown RBP22.53■■□□□ 1.2
TRAF4-204ENST00000422344 CFIP05156 583 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 CEACAM1P13688 526 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 TNFAIP3P21580 790 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 NUMBP49757 651 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 PLK1P53350 603 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 RPS14P62263 151 aaKnown RBP22.53■■□□□ 1.2
TRAF4-204ENST00000422344 C1QBPQ07021 282 aaKnown RBP22.53■■□□□ 1.2
TRAF4-204ENST00000422344 PTP4A2Q12974 167 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 C5orf22Q49AR2 442 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 WDR45BQ5MNZ6 344 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 PPP1R2P3Q6NXS1 205 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 DNAJC24Q6P3W2 148 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 FAM124AQ86V42 546 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 SLC41A1Q8IVJ1 513 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 JOSD2Q8TAC2 188 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 BAP1Q92560 729 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 ZNF419Q96HQ0 510 aaPredicted RBP22.53■■□□□ 1.2
TRAF4-204ENST00000422344 RPL10LQ96L21 214 aaKnown RBP22.53■■□□□ 1.2
TRAF4-204ENST00000422344 HAPLN3Q96S86 360 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 MUC3BQ9H195 1237 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 TMPRSS4Q9NRS4 437 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 TMEM74BQ9NUR3 256 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 EVLQ9UI08 416 aaPredicted RBP22.53■■□□□ 1.2
TRAF4-204ENST00000422344 SLC25A13Q9UJS0 675 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 ZMIZ1Q9ULJ6 1067 aa22.53■■□□□ 1.2
TRAF4-204ENST00000422344 PI4KAP42356 2102 aa22.52■■□□□ 1.2
TRAF4-204ENST00000422344 ASPMQ8IZT6 3477 aa22.52■■□□□ 1.2
TRAF4-204ENST00000422344 TARSL2A2RTX5 802 aaKnown RBP22.52■■□□□ 1.2
TRAF4-204ENST00000422344 C2CD4BA6NLJ0 364 aa22.52■■□□□ 1.2
TRAF4-204ENST00000422344 TTC34A8MYJ7 566 aa22.52■■□□□ 1.2
TRAF4-204ENST00000422344 SIN3BO75182 1162 aa22.52■■□□□ 1.2
TRAF4-204ENST00000422344 GJB6O95452 261 aa22.52■■□□□ 1.2
TRAF4-204ENST00000422344 IGLV3-19P01714 112 aa22.52■■□□□ 1.2
TRAF4-204ENST00000422344 RHOCP08134 193 aa22.52■■□□□ 1.2
TRAF4-204ENST00000422344 CSRP1P21291 193 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms