RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ATP2A3Q93084 1043 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 CERS2Q96G23 380 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 TSPAN18Q96SJ8 248 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 ACBD6Q9BR61 282 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 IARS2Q9NSE4 1012 aaKnown RBP11.2□□□□□ -0.62
DDX56-203ENST00000421223 NDFIP2Q9NV92 336 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 ARL8BQ9NVJ2 186 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 MOCS1Q9NZB8 636 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 DNAJB4Q9UDY4 337 aa11.2□□□□□ -0.62
DDX56-203ENST00000421223 ZNF638Q14966 1978 aaKnown RBP11.2□□□□□ -0.62
DDX56-203ENST00000421223 DDHD2O94830 711 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 TBX18O95935 607 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 ALDOAP04075 364 aaKnown RBP11.19□□□□□ -0.62
DDX56-203ENST00000421223 CD68P34810 354 aaPredicted RBP11.19□□□□□ -0.62
DDX56-203ENST00000421223 GARSP41250 739 aaKnown RBP11.19□□□□□ -0.62
DDX56-203ENST00000421223 PDE1CQ14123 709 aaPredicted RBP11.19□□□□□ -0.62
DDX56-203ENST00000421223 CES4AQ5XG92 561 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 ATG16L1Q676U5 607 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 RAPH1Q70E73 1250 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 CRLF3Q8IUI8 442 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 PNPLA1Q8N8W4 532 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 ATAD1Q8NBU5 361 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 FCRL2Q96LA5 508 aaPredicted RBP11.19□□□□□ -0.62
DDX56-203ENST00000421223 PPP1R36Q96LQ0 422 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 TBC1D10AQ9BXI6 508 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 C20orf27Q9GZN8 174 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 ZNF180Q9UJW8 692 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 SLC27A5Q9Y2P5 690 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 A0A1W2PQH9 124 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 C2CD2LO14523 706 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 TADA2AO75478 443 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 ENO1P06733 434 aaKnown RBP11.19□□□□□ -0.62
DDX56-203ENST00000421223 T-ENOLP0DO92 83 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 MX2P20592 715 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 SERPINB6P35237 376 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 AVPR1AP37288 418 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 SERPINB9P50453 376 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 TUBP50607 506 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 KDSRQ06136 332 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 SEPT6Q14141 434 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 TEX44Q53QW1 395 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 ATPAF2Q8N5M1 289 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 SHCBP1LQ9BZQ2 653 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 NMUR1Q9HB89 426 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 ARHGEF3Q9NR81 526 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 TMEM88BA6NKF7 163 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 TRPA1O75762 1119 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 ESRRAP11474 423 aaPredicted RBP11.19□□□□□ -0.62
DDX56-203ENST00000421223 CXCR3P49682 368 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 CDK16Q00536 496 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 MGAT3Q09327 533 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 GRIK3Q13003 919 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 RAB41Q5JT25 222 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 SLC25A41Q8N5S1 370 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 TTC9BQ8N6N2 239 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
DDX56-203ENST00000421223 MTBPQ96DY7 904 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 GLT1D1Q96MS3 346 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 SLC9A7Q96T83 725 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 MLPHQ9BV36 600 aaPredicted RBP11.19□□□□□ -0.62
DDX56-203ENST00000421223 LRRC40Q9H9A6 602 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 HCSTQ9UBK5 93 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 SLC39A10Q9ULF5 831 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 MKI67P46013 3256 aaKnown RBP11.19□□□□□ -0.62
DDX56-203ENST00000421223 SHROOM3Q8TF72 1996 aa11.19□□□□□ -0.62
DDX56-203ENST00000421223 TTC24A2A3L6 582 aaPredicted RBP11.18□□□□□ -0.62
DDX56-203ENST00000421223 FAM155AB1AL88 458 aaPredicted RBP11.18□□□□□ -0.62
DDX56-203ENST00000421223 FCHO1O14526 889 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 ITM2AO43736 263 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 TOMM70O94826 608 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 DHRS4L1P0CG22 281 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 EZRP15311 586 aaKnown RBP11.18□□□□□ -0.62
DDX56-203ENST00000421223 NMBRP28336 390 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 GLRBP48167 497 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 MXRA7P84157 204 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 EFEMP1Q12805 493 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 BHLHA9Q7RTU4 235 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 SPATA6LQ8N4H0 392 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 DCLK2Q8N568 766 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 NTAN1Q96AB6 310 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 NMUR2Q9GZQ4 415 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 TMEM216Q9P0N5 145 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 C9IYK1 514 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 DNAJC6O75061 913 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 AP2A1O95782 977 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 DLDP09622 509 aaKnown RBP11.18□□□□□ -0.62
DDX56-203ENST00000421223 CCNB1P14635 433 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 GATMP50440 423 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 SESN3P58005 492 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 PPIDQ08752 370 aaKnown RBP11.18□□□□□ -0.62
DDX56-203ENST00000421223 RIPK1Q13546 671 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 PRPSAP1Q14558 356 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 ACCSLQ4AC99 568 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 C14orf80Q86SX3 495 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 RNF180Q86T96 592 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
DDX56-203ENST00000421223 ABI1Q8IZP0 508 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 CNTD1Q8N815 330 aa11.18□□□□□ -0.62
DDX56-203ENST00000421223 UTP4Q969X6 686 aaKnown RBP11.18□□□□□ -0.62
DDX56-203ENST00000421223 RAB3IPQ96QF0 476 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms