RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 AP4S1Q9Y587 144 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 NUB1Q9Y5A7 615 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 CORINQ9Y5Q5 1042 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 CFAP99D6REC4 459 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 CNOT3O75175 753 aaKnown RBP15.03■□□□□ -0
NCKIPSD-204ENST00000416649 MAPTP10636 758 aaKnown RBP15.03■□□□□ -0
NCKIPSD-204ENST00000416649 KRT3P12035 628 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 ZNF182P17025 639 aaPredicted RBP15.03■□□□□ -0
NCKIPSD-204ENST00000416649 RCVRNP35243 200 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 ORC1Q13415 861 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 EML3Q32P44 896 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 ZBED5Q49AG3 693 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 ARHGEF16Q5VV41 709 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 ZBTB49Q6ZSB9 765 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 PCDH20Q8N6Y1 951 aaKnown RBP15.03■□□□□ -0
NCKIPSD-204ENST00000416649 DCPSQ96C86 337 aaKnown RBP15.03■□□□□ -0
NCKIPSD-204ENST00000416649 FAM96AQ9H5X1 160 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 PTPRJQ12913 1337 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 RGSL1A5PLK6 1076 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 H3BMQ9 156 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 ZNF195O14628 629 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 GLRA3O75311 464 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 ALDOAP04075 364 aaKnown RBP15.02■□□□□ -0
NCKIPSD-204ENST00000416649 GNAO1P09471 354 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 PTPN7P35236 360 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 GRIA1P42261 906 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 QARSP47897 775 aaKnown RBP15.02■□□□□ -0
NCKIPSD-204ENST00000416649 TXNL4AP83876 142 aaKnown RBP15.02■□□□□ -0
NCKIPSD-204ENST00000416649 MTMR1Q13613 665 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 NEDD8Q15843 81 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 NIPAL1Q6NVV3 410 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 RWDD4Q6NW29 188 aaKnown RBP15.02■□□□□ -0
NCKIPSD-204ENST00000416649 KCNT2Q6UVM3 1135 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 CARM1Q86X55 608 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 MAP4K3Q8IVH8 894 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 KIAA0319LQ8IZA0 1049 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 SLC15A4Q8N697 577 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 COG8Q96MW5 612 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 NACA2Q9H009 215 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 RPF2Q9H7B2 306 aaKnown RBP15.02■□□□□ -0
NCKIPSD-204ENST00000416649 PNPLA8Q9NP80 782 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 SLC8A2Q9UPR5 921 aa15.02■□□□□ -0
NCKIPSD-204ENST00000416649 COL2A1P02458 1487 aaPredicted RBP15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 A0A087WXM4 84 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 TRDMT1O14717 391 aaKnown RBP15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 CLIC3O95833 236 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 GRK2P25098 689 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 PCYT1AP49585 367 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 CDH6P55285 790 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 PERM1Q5SV97 790 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 SCARA5Q6ZMJ2 495 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 DPH6Q7L8W6 267 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 EEPD1Q7L9B9 569 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 RAVER1Q8IY67 606 aaKnown RBP15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 ARFGAP1Q8N6T3 406 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 TMEM35BQ8NCS4 154 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 LPAR1Q92633 364 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 HPS1Q92902 700 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 TAMM41Q96BW9 452 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 MXRA8Q9BRK3 442 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 SPON1Q9HCB6 807 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 MKS1Q9NXB0 559 aa15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 KIAA1522Q9P206 1035 aaPredicted RBP15.02□□□□□ -0.01
NCKIPSD-204ENST00000416649 BRCA2P51587 3418 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 SAC3D1A6NKF1 404 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 A8MU76 341 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 GOLGA8TH3BQL2 631 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 CHADO15335 359 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 MX2P20592 715 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 RBL1P28749 1068 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 TYK2P29597 1187 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 SLC25A11Q02978 314 aaKnown RBP15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 PTK2BQ14289 1009 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 CHST15Q7LFX5 561 aaPredicted RBP15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 TDRD5Q8NAT2 981 aaKnown RBP15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 BSNDQ8WZ55 320 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 KLHL25Q9H0H3 589 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 ZNF408Q9H9D4 720 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 POLR1BQ9H9Y6 1135 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 COPG2Q9UBF2 871 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 DAPK2Q9UIK4 370 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 VNN1O95497 513 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 MAP4P27816 1152 aaKnown RBP15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 TCF7P36402 384 aaPredicted RBP15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 SERPINB9P50453 376 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 TRPC3Q13507 836 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 ZACNQ401N2 412 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 GALNT18Q6P9A2 607 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 LYSMD3Q7Z3D4 306 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 CMC1Q7Z7K0 106 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 TMEM126BQ8IUX1 230 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 STARD8Q92502 1023 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 DLG3Q92796 817 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 KLRG1Q96E93 195 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 OTUD5Q96G74 571 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 ZNF597Q96LX8 424 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 CDH19Q9H159 772 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 TMA7Q9Y2S6 64 aaKnown RBP15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 CDY2AQ9Y6F7 541 aa15.01□□□□□ -0.01
NCKIPSD-204ENST00000416649 CDY1Q9Y6F8 540 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms