RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ECHS1P30084 290 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 LSM3P62310 102 aaKnown RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 CWF19L1Q69YN2 538 aaKnown RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 TAF2Q6P1X5 1199 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 TRMT10BQ6PF06 316 aaKnown RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 FAM43BQ6ZT52 329 aaPredicted RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 FAM228AQ86W67 206 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 HASPINQ8TF76 798 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 MBOAT7Q96N66 472 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 ACOX2Q99424 681 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 EBF2Q9HAK2 575 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 SH3BGRLO75368 114 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 TOP3BO95985 862 aaKnown RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 ABHD2P08910 425 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 MUTP22033 750 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 BFSP2Q13515 415 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 CACHD1Q5VU97 1274 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 RSBN1Q5VWQ0 802 aaPredicted RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 ILDR2Q71H61 639 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 SNRNP25Q9BV90 132 aaKnown RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 FAM192AQ9GZU8 254 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 NT5MQ9NPB1 228 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 EGFL7Q9UHF1 273 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 DRG1Q9Y295 367 aaKnown RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 TMA7Q9Y2S6 64 aaKnown RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 CNTNAP2Q9UHC6 1331 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 COL5A2P05997 1499 aaPredicted RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 TCRBV7S3A2A0A539 114 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 LACTBL1A8MY62 500 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 MT-ND1P03886 318 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 GSNP06396 782 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 VCLP18206 1134 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 GRIA3P42263 894 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 MAP3K7CLP57077 242 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 EFL1Q7Z2Z2 1120 aaKnown RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 NECAB2Q7Z6G3 386 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 APLFQ8IW19 511 aaPredicted RBP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 CPXM1Q96SM3 734 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 MYOZ2Q9NPC6 264 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 RBM22Q9NW64 420 aaKnown RBP eCLIP13.13□□□□□ -0.31
SCN1B-202ENST00000415950 MRASO14807 208 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 B4GALT5O43286 388 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ITGAVP06756 1048 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 MMP8P22894 467 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 RAD23AP54725 363 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 RTP1P59025 263 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 SCIMPQ6UWF3 145 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 B3GNT6Q6ZMB0 384 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 NET1Q7Z628 596 aaPredicted RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 SATL1Q86VE3 508 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 DAW1Q8N136 415 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 MYO1HQ8N1T3 1032 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 WDR48Q8TAF3 677 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 NSMCE2Q96MF7 247 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 SYBUQ9NX95 663 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 MAP3K20Q9NYL2 800 aaKnown RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 CROTQ9UKG9 612 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 C15orf38-AP3S2A0A0A6YYH1 394 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 CFAP99D6REC4 459 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 PRRG1O14668 218 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 CYBBP04839 570 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 CYP2C8P10632 490 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 EIF4BP23588 611 aaKnown RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 GEMP55040 296 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 GBE1Q04446 702 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 DCTN2Q13561 401 aaKnown RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 FASTKQ14296 549 aaKnown RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 PERM1Q5SV97 790 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ARMC4Q5T2S8 1044 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 C6orf52Q5T4I8 152 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 VN1R5Q7Z5H4 357 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ARPINQ7Z6K5 226 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 KCNMB4Q86W47 210 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 DHFR2Q86XF0 187 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 DEFB106AQ8N104 65 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 FBXW8Q8N3Y1 598 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 FAM81AQ8TBF8 368 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 FAM120BQ96EK7 910 aaKnown RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 TUBGCP5Q96RT8 1024 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 NPAS2Q99743 824 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 DSEQ9UL01 958 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 COPG1Q9Y678 874 aaKnown RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 PIPSLA2A3N6 862 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 DYTNA2CJ06 578 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 KRT87PA6NCN2 255 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 SIGLEC16A6NMB1 481 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 PAPSS1O43252 624 aaPredicted RBP13.12□□□□□ -0.31
SCN1B-202ENST00000415950 LRCH4O75427 683 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 GUCA1CO95843 209 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 CCNE2O96020 404 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 NR4A1P22736 598 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 SCNN1BP51168 640 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ADIGQ0VDE8 80 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ITGADQ13349 1161 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 EEF1DP3Q658K8 133 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF470Q6ECI4 717 aa13.12□□□□□ -0.31
SCN1B-202ENST00000415950 TYW3Q6IPR3 259 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms