RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 LUC7L3O95232 432 aaKnown RBP21.14■□□□□ 0.97
PTPRU-203ENST00000415600 NNMTP40261 264 aa21.14■□□□□ 0.97
PTPRU-203ENST00000415600 SEMA3BQ13214 749 aa21.14■□□□□ 0.97
PTPRU-203ENST00000415600 SLC12A1Q13621 1099 aa21.14■□□□□ 0.97
PTPRU-203ENST00000415600 ZDHHC17Q8IUH5 632 aa21.14■□□□□ 0.97
PTPRU-203ENST00000415600 PRICKLE1Q96MT3 831 aaPredicted RBP21.14■□□□□ 0.97
PTPRU-203ENST00000415600 BTBD1Q9H0C5 482 aa21.14■□□□□ 0.97
PTPRU-203ENST00000415600 SGK2Q9HBY8 427 aa21.14■□□□□ 0.97
PTPRU-203ENST00000415600 ACP6Q9NPH0 428 aa21.14■□□□□ 0.97
PTPRU-203ENST00000415600 PRSS16Q9NQE7 514 aa21.14■□□□□ 0.97
PTPRU-203ENST00000415600 DNAAF2Q9NVR5 837 aaKnown RBP21.14■□□□□ 0.97
PTPRU-203ENST00000415600 DDIT4Q9NX09 232 aa21.14■□□□□ 0.97
PTPRU-203ENST00000415600 ASCC3Q8N3C0 2202 aaKnown RBP21.13■□□□□ 0.97
PTPRU-203ENST00000415600 CACNA1BQ00975 2339 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 KCNU1A8MYU2 1149 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 BCAT2O15382 392 aaPredicted RBP21.13■□□□□ 0.97
PTPRU-203ENST00000415600 SRPRAP08240 638 aaKnown RBP21.13■□□□□ 0.97
PTPRU-203ENST00000415600 TACR2P21452 398 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 CSKP41240 450 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 SULT2A1Q06520 285 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 FAM124AQ86V42 546 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 PASD1Q8IV76 773 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 CHP1Q99653 195 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 RRN3Q9NYV6 651 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 CYTH4Q9UIA0 394 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 PAXBP1Q9Y5B6 917 aa21.13■□□□□ 0.97
PTPRU-203ENST00000415600 CACNA1EQ15878 2313 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 GIPC1O14908 333 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 C7P10643 843 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 TERF1P54274 439 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 OR6B2Q6IFH4 312 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 CFAP52Q8N1V2 620 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 ZCCHC9Q8N567 271 aaKnown RBP21.12■□□□□ 0.97
PTPRU-203ENST00000415600 ZNF366Q8N895 744 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 MSANTD4Q8NCY6 345 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 WFDC5Q8TCV5 224 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 GANCQ8TET4 914 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 SNX19Q92543 992 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 BAP1Q92560 729 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 SLC2A13Q96QE2 648 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 CPXM1Q96SM3 734 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 DESI2Q9BSY9 194 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 PLCB1Q9NQ66 1216 aa21.12■□□□□ 0.97
PTPRU-203ENST00000415600 SEMA4FO95754 770 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 CER1O95813 267 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 IGLV3-25P01717 112 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 MAOBP27338 520 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 RPS14P62263 151 aaKnown RBP21.11■□□□□ 0.97
PTPRU-203ENST00000415600 TEAD4Q15561 434 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 ST3GAL2Q16842 350 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 HNRNPA1L2Q32P51 320 aaKnown RBP21.11■□□□□ 0.97
PTPRU-203ENST00000415600 RAP1GAP2Q684P5 730 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 USP30Q70CQ3 517 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 PIP4P1Q86T03 277 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 DEFB106AQ8N104 65 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 TMEM35BQ8NCS4 154 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 C1orf131Q8NDD1 294 aaKnown RBP21.11■□□□□ 0.97
PTPRU-203ENST00000415600 FSCN3Q9NQT6 498 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 PCDHB9Q9Y5E1 797 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 EPN1Q9Y6I3 576 aaPredicted RBP21.11■□□□□ 0.97
PTPRU-203ENST00000415600 CEP295Q9C0D2 2601 aa21.11■□□□□ 0.97
PTPRU-203ENST00000415600 SYNJ2BP-COX16A0A087WUM0 186 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 EDDM13A0A1B0GTR0 161 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 TARSL2A2RTX5 802 aaKnown RBP21.1■□□□□ 0.97
PTPRU-203ENST00000415600 TRIM16O95361 564 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 AFF3P51826 1226 aaKnown RBP21.1■□□□□ 0.97
PTPRU-203ENST00000415600 ECT2LQ008S8 904 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 FOXC1Q12948 553 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 GRIK2Q13002 908 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 RAPGEF1Q13905 1077 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 PITRM1Q5JRX3 1037 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 SND1Q7KZF4 910 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTPRU-203ENST00000415600 FAM71AQ8IYT1 594 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 RSPH9Q9H1X1 276 aaPredicted RBP21.1■□□□□ 0.97
PTPRU-203ENST00000415600 GANQ9H2C0 597 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 COX16Q9P0S2 106 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 EIF2B4Q9UI10 523 aaKnown RBP21.1■□□□□ 0.97
PTPRU-203ENST00000415600 STAP1Q9ULZ2 295 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 A0A1B0GVM2 712 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 TCAF2A6NFQ2 919 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 FOXN3O00409 490 aaPredicted RBP21.1■□□□□ 0.97
PTPRU-203ENST00000415600 NDUFA10O95299 355 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 SIM1P81133 766 aaPredicted RBP21.1■□□□□ 0.97
PTPRU-203ENST00000415600 SLC6A3Q01959 620 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 APBA1Q02410 837 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 DPY19L2P1Q6NXN4 242 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 SLC26A9Q7LBE3 791 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 SLC47A2Q86VL8 602 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 CCDC170Q8IYT3 715 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 SYN2Q92777 582 aaPredicted RBP21.1■□□□□ 0.97
PTPRU-203ENST00000415600 LMLNQ96KR4 655 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 ERVW-1Q9UQF0 538 aa21.1■□□□□ 0.97
PTPRU-203ENST00000415600 LRRC53A6NM62 1247 aa21.09■□□□□ 0.97
PTPRU-203ENST00000415600 DAB1O75553 588 aa21.09■□□□□ 0.97
PTPRU-203ENST00000415600 NOS2P35228 1153 aa21.09■□□□□ 0.97
PTPRU-203ENST00000415600 TAF5Q15542 800 aa21.09■□□□□ 0.97
PTPRU-203ENST00000415600 ACBD5Q5T8D3 534 aaPredicted RBP21.09■□□□□ 0.97
PTPRU-203ENST00000415600 FAM183BPQ6ZVS7 135 aa21.09■□□□□ 0.97
PTPRU-203ENST00000415600 WDTC1Q8N5D0 677 aa21.09■□□□□ 0.97
PTPRU-203ENST00000415600 PABPC3Q9H361 631 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms