RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 STK10O94804 968 aaKnown RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 CYP2C8P10632 490 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 RALBP11234 206 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 CNTFP26441 200 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 MSX2P35548 267 aaPredicted RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 MTTPP55157 894 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 ADIGQ0VDE8 80 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 PAFAH1B3Q15102 231 aaKnown RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 DBN1Q16643 649 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 SLC25A52Q3SY17 297 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 TSTD2Q5T7W7 516 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 UGT2A3Q6UWM9 527 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 STRADAQ7RTN6 431 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 PIGZQ86VD9 579 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 RASSF3Q86WH2 238 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 CCDC124Q96CT7 223 aaKnown RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 LENG8Q96PV6 779 aaPredicted RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 PRDM16Q9HAZ2 1276 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 PPP1R1BQ9UD71 204 aaPredicted RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 ANGPTL2Q9UKU9 493 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 A6NJR5 290 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 TARM1B6A8C7 271 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 OR6B1O95007 311 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 MPSTP25325 297 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 COPAP53621 1224 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 KLF10Q13118 480 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 TBCCQ15814 346 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 GSTA3Q16772 222 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 LILRA2Q8N149 483 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 HIPK4Q8NE63 616 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 PPTC7Q8NI37 304 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 HMGCLL1Q8TB92 370 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 AGR3Q8TD06 166 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.09□□□□□ -0.79
SS18-203ENST00000415083 IGSF9Q9P2J2 1179 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 DCDC2Q9UHG0 476 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 SCOCQ9UIL1 159 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 MAGED2Q9UNF1 606 aaPredicted RBP10.09□□□□□ -0.79
SS18-203ENST00000415083 KCNH4Q9UQ05 1017 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 NEU3Q9UQ49 428 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 SYNJ2BP-COX16A0A087WUM0 186 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 RBM47A0AV96 593 aaKnown RBP10.09□□□□□ -0.79
SS18-203ENST00000415083 CASQ2O14958 399 aaPredicted RBP10.09□□□□□ -0.79
SS18-203ENST00000415083 ZBTB24O43167 697 aaPredicted RBP10.09□□□□□ -0.79
SS18-203ENST00000415083 COX4I1P13073 169 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 FDFT1P37268 417 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 AP2B1P63010 937 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 MS4A2Q01362 244 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 SNAPC2Q13487 334 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 TTLL4Q14679 1199 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 GRIK4Q16099 956 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 UBXN11Q5T124 520 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 TMEM198Q66K66 360 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 AAGABQ6PD74 315 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 C4orf22Q6V702 233 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 ZDHHC17Q8IUH5 632 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 SLC16A10Q8TF71 515 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 AGAP3Q96P47 875 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 GATA5Q9BWX5 397 aaPredicted RBP10.09□□□□□ -0.79
SS18-203ENST00000415083 CDH19Q9H159 772 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 FAM124BQ9H5Z6 455 aaPredicted RBP10.09□□□□□ -0.79
SS18-203ENST00000415083 TNFRSF12AQ9NP84 129 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 CHRAC1Q9NRG0 131 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 SETD4Q9NVD3 440 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 COX16Q9P0S2 106 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 SEPT10Q9P0V9 454 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 SORCS3Q9UPU3 1222 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 RPS6KL1Q9Y6S9 549 aa10.09□□□□□ -0.79
SS18-203ENST00000415083 A0A1B0GTW7 788 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 HACD1B0YJ81 288 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 RECQL4O94761 1208 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 SLC25A27O95847 323 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 ETS2P15036 469 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 ACAT1P24752 427 aaKnown RBP10.08□□□□□ -0.8
SS18-203ENST00000415083 SULT1E1P49888 294 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 AFF1P51825 1210 aaKnown RBP10.08□□□□□ -0.8
SS18-203ENST00000415083 TLR1Q15399 786 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 INSCQ1MX18 579 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 TICAM1Q8IUC6 712 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 FBXW8Q8N3Y1 598 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 PNPLA1Q8N8W4 532 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 RNF217Q8TC41 542 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 GDPD5Q8WTR4 605 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 PPP1R36Q96LQ0 422 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 TRAPPC9Q96Q05 1148 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 APOL2Q9BQE5 337 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 CASS4Q9NQ75 786 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 GOLGA8QA0A0J9YX86 632 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 MYOCOSA0A1B0GUC4 107 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 GOLGA8OA6NCC3 632 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 ANKRD33BA6NCL7 494 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 GOLGA8NF8WBI6 632 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 TK2O00142 265 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 DDNO94850 711 aaPredicted RBP10.08□□□□□ -0.8
SS18-203ENST00000415083 ATP5BP06576 529 aaKnown RBP10.08□□□□□ -0.8
SS18-203ENST00000415083 CPA3P15088 417 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 SMPD1P17405 629 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 CALRP27797 417 aaKnown RBP10.08□□□□□ -0.8
SS18-203ENST00000415083 NMBRP28336 390 aa10.08□□□□□ -0.8
SS18-203ENST00000415083 SCNN1AP37088 669 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms