RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 KANK1Q14678 1352 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 IBTKQ9P2D0 1353 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 CDK13Q14004 1512 aaKnown RBP4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 KIAA0556O60303 1618 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 SLC22A23A1A5C7 686 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 M0QZQ0 153 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 TLX3O43711 291 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 TAF5LO75529 589 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 NTN1O95631 604 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 ANXA6P08133 673 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 TSPY4P0CV99 314 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 TSPY10P0CW01 314 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 ALADP13716 330 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 ITGB6P18564 788 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 NDUFS1P28331 727 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 SLC8A1P32418 973 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 STAT6P42226 847 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 TDO2P48775 406 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 DMWDQ09019 674 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 MTX1Q13505 466 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 CBFBQ13951 182 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 MORC3Q14149 939 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 WDR43Q15061 677 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 P3H1Q32P28 736 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 LEXMQ3ZCV2 418 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 ARMC3Q5W041 872 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 IL31Q6EBC2 164 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 CLEC17AQ6ZS10 378 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 PIM3Q86V86 326 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 MMP21Q8N119 569 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 SRFBP1Q8NEF9 429 aaKnown RBP4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 NSMCE1Q8WV22 266 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 KAT2BQ92831 832 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 TESK2Q96S53 571 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 ELOVL1Q9BW60 279 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 SEZ6LQ9BYH1 1024 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 STK33Q9BYT3 514 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 TRIM2Q9C040 744 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 FOXP1Q9H334 677 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 CERS4Q9HA82 394 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 PAPOLBQ9NRJ5 636 aaKnown RBP4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 LUZP4Q9P127 313 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 UBE2J1Q9Y385 318 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 EMSYQ7Z589 1322 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 NUP155O75694 1391 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 C9orf84Q5VXU9 1444 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 ERBINQ96RT1 1412 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 DISP1Q96F81 1524 aa4.11□□□□□ -1.75
HMGB3P23-201ENST00000414981 SYNMO15061 1565 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 MAST1Q9Y2H9 1570 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 J3KTA2 159 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 INSIG1O15503 277 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 TULP3O75386 442 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 CYP19A1P11511 503 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 AKR1A1P14550 325 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 ST6GAL1P15907 406 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 IL6STP40189 918 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 NEK3P51956 506 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 POLGP54098 1239 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 TOMM20Q15388 145 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 CDC37Q16543 378 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 ZNF260Q3ZCT1 412 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 C16orf54Q6UWD8 224 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 KRT27Q7Z3Y8 459 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 TECPR1Q7Z6L1 1165 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 FAM186BQ8IYM0 893 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 FAM47BQ8NA70 645 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 SLC44A5Q8NCS7 719 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 SLC22A17Q8WUG5 538 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 WDR60Q8WVS4 1066 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 SNX21Q969T3 373 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 SGCZQ96LD1 299 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 MYCBPQ99417 103 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 MOV10Q9HCE1 1003 aaKnown RBP4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 FSCN3Q9NQT6 498 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 NFU1Q9UMS0 254 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 B3GNT3Q9Y2A9 372 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 KIF16BQ96L93 1317 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 ZNF335Q9H4Z2 1342 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 TDRD9Q8NDG6 1382 aaKnown RBP4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 ARHGAP31Q2M1Z3 1444 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 YEATS2Q9ULM3 1422 aa4.1□□□□□ -1.75
HMGB3P23-201ENST00000414981 TRBV5-3A0A0A0MS03 114 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 F8W810 466 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 PIP5K1CO60331 668 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 MTA2O94776 668 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 ITGA5P08648 1049 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 GEMIN4P57678 1058 aaKnown RBP4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 ZBED6P86452 979 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 CALD1Q05682 793 aaKnown RBP4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 SLC4A8Q2Y0W8 1093 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 ANXA2RQ3ZCQ2 193 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 MANEAQ5SRI9 462 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 CCDC70Q6NSX1 233 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 WDR93Q6P2C0 686 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 C16orf89Q6UX73 402 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 SRLQ86TD4 932 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 RHPN2Q8IUC4 686 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 WDR63Q8IWG1 891 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 SYTL1Q8IYJ3 562 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms