RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 COMMD8Q9NX08 183 aa11.6□□□□□ -0.55
LINC00330-201ENST00000414562 XPO7Q9UIA9 1087 aaKnown RBP11.6□□□□□ -0.55
LINC00330-201ENST00000414562 ADAM21Q9UKJ8 722 aa11.6□□□□□ -0.55
LINC00330-201ENST00000414562 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
LINC00330-201ENST00000414562 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.59□□□□□ -0.55
LINC00330-201ENST00000414562 SMIM23A6NLE4 172 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 DCLK1O15075 740 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 MOCS2O96007 188 aaPredicted RBP11.59□□□□□ -0.55
LINC00330-201ENST00000414562 C1RP00736 705 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 LRG1P02750 347 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 SRGAP2BP0DMP2 458 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 GABRR2P28476 465 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 EPHB2P29323 1055 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 EPHA5P54756 1037 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 EFEMP1Q12805 493 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 PPP2R5DQ14738 602 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 COL19A1Q14993 1142 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 PAFAH1B3Q15102 231 aaKnown RBP11.59□□□□□ -0.55
LINC00330-201ENST00000414562 PRSS36Q5K4E3 855 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 RARS2Q5T160 578 aaKnown RBP11.59□□□□□ -0.55
LINC00330-201ENST00000414562 ANKRD22Q5VYY1 191 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 ICE2Q659A1 982 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 TXNDC8Q6A555 127 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 ARHGEF18Q6ZSZ5 1173 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 NETO2Q8NC67 525 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 RIN3Q8TB24 985 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 ITFG1Q8TB96 612 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 CCDC110Q8TBZ0 833 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 HTR3CQ8WXA8 447 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 ZSWIM3Q96MP5 696 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 OLFM3Q96PB7 478 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 HAPLN3Q96S86 360 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 LGMNQ99538 433 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 OSBPL2Q9H1P3 480 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 S1PR5Q9H228 398 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 ARHGEF38Q9NXL2 777 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 NINJ2Q9NZG7 142 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 SEPT10Q9P0V9 454 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 A0A1W2PRU2 124 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 PAGE1O75459 146 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 GCATO75600 419 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 LRIG2O94898 1065 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 RHOP08100 348 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 SLC2A3P11169 496 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 MYL4P12829 197 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 TBX4P57082 545 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 PDIA2Q13087 525 aaKnown RBP11.59□□□□□ -0.55
LINC00330-201ENST00000414562 DNAJC21Q5F1R6 531 aaKnown RBP11.59□□□□□ -0.55
LINC00330-201ENST00000414562 C10orf120Q5SQS8 335 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 HP1BP3Q5SSJ5 553 aaPredicted RBP11.59□□□□□ -0.55
LINC00330-201ENST00000414562 UBAP2Q5T6F2 1119 aaKnown RBP11.59□□□□□ -0.55
LINC00330-201ENST00000414562 AGBL2Q5U5Z8 902 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 SNX30Q5VWJ9 437 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 MSANTD2Q6P1R3 559 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 PPP1R21Q6ZMI0 780 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 PDIK1LQ8N165 341 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 MICALL1Q8N3F8 863 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 SH2D3CQ8N5H7 860 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 NAT8LQ8N9F0 302 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 ST13P5Q8NFI4 369 aaPredicted RBP11.59□□□□□ -0.55
LINC00330-201ENST00000414562 ADAMTS19Q8TE59 1207 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 TTC25Q96NG3 672 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 CCDC77Q9BR77 488 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 OLA1Q9NTK5 396 aaKnown RBP11.59□□□□□ -0.55
LINC00330-201ENST00000414562 LMCD1Q9NZU5 365 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 RAD54BQ9Y620 910 aa11.59□□□□□ -0.55
LINC00330-201ENST00000414562 SHROOM3Q8TF72 1996 aa11.58□□□□□ -0.55
LINC00330-201ENST00000414562 RASGRF2O14827 1237 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 CHADO15335 359 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 COCHO43405 550 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 OAS1P00973 400 aaKnown RBP11.58□□□□□ -0.56
LINC00330-201ENST00000414562 APOEP02649 317 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 HOXA9P31269 272 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 SERPINB6P35237 376 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 CCDC85BQ15834 202 aaPredicted RBP11.58□□□□□ -0.56
LINC00330-201ENST00000414562 FAM182AQ5T1J6 154 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 SYCP2LQ5T4T6 812 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 C6orf118Q5T5N4 469 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 ANKRD54Q6NXT1 300 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 RELL1Q8IUW5 271 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 ZBED8Q8IZ13 594 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 ZFRQ96KR1 1074 aaKnown RBP11.58□□□□□ -0.56
LINC00330-201ENST00000414562 CEP295NLQ96MC4 621 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 ZNF512Q96ME7 567 aaPredicted RBP11.58□□□□□ -0.56
LINC00330-201ENST00000414562 SLC46A2Q9BY10 475 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 SMG9Q9H0W8 520 aaKnown RBP11.58□□□□□ -0.56
LINC00330-201ENST00000414562 KDM4CQ9H3R0 1056 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 GKN1Q9NS71 199 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 CLIC5Q9NZA1 410 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 SLC12A6Q9UHW9 1150 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 TLR6Q9Y2C9 796 aa11.58□□□□□ -0.56
LINC00330-201ENST00000414562 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.57□□□□□ -0.56
LINC00330-201ENST00000414562 TCRBV7S3A2A0A539 114 aa11.57□□□□□ -0.56
LINC00330-201ENST00000414562 C5orf60A6NFR6 353 aa11.57□□□□□ -0.56
LINC00330-201ENST00000414562 E7EVH7 732 aa11.57□□□□□ -0.56
LINC00330-201ENST00000414562 NCAM2O15394 837 aa11.57□□□□□ -0.56
LINC00330-201ENST00000414562 RGS16O15492 202 aaPredicted RBP11.57□□□□□ -0.56
LINC00330-201ENST00000414562 TLR5O60602 858 aa11.57□□□□□ -0.56
LINC00330-201ENST00000414562 ZNF189O75820 626 aaPredicted RBP11.57□□□□□ -0.56
LINC00330-201ENST00000414562 HNRNPA1P09651 372 aaKnown RBP eCLIP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms