RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 VPS28Q9UK41 221 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 PAXBP1Q9Y5B6 917 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 ITIH6Q6UXX5 1313 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 F8VZ95 297 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 GFPT2O94808 682 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 IL1BP01584 269 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 MMEP08473 750 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 NUMA1Q14980 2115 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 KRT31Q15323 416 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 C2CD6Q53TS8 623 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 KIAA0895LQ68EN5 471 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 C14orf80Q86SX3 495 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 NOP9Q86U38 636 aaKnown RBP17.31■□□□□ 0.36
COL6A2-205ENST00000413758 NAXDQ8IW45 347 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 ANKRD20A12PQ8NF67 263 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 SETD7Q8WTS6 366 aaKnown RBP17.31■□□□□ 0.36
COL6A2-205ENST00000413758 CPA5Q8WXQ8 436 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 CAMK1GQ96NX5 476 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 TBCBQ99426 244 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 NPY6RQ99463 290 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 NAA15Q9BXJ9 866 aaKnown RBP17.31■□□□□ 0.36
COL6A2-205ENST00000413758 TKTL2Q9H0I9 626 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 MUC3BQ9H195 1237 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 IL21RQ9HBE5 538 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 FAM207AQ9NSI2 230 aaPredicted RBP17.31■□□□□ 0.36
COL6A2-205ENST00000413758 PIGVQ9NUD9 493 aa17.31■□□□□ 0.36
COL6A2-205ENST00000413758 LRRC72A6NJI9 287 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 BNIP3LO60238 219 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 CLDN11O75508 207 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 ADCY5O95622 1261 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 LSM8O95777 96 aaKnown RBP17.3■□□□□ 0.36
COL6A2-205ENST00000413758 TOP3BO95985 862 aaKnown RBP17.3■□□□□ 0.36
COL6A2-205ENST00000413758 ADH1BP00325 375 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 F9P00740 461 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 ZNF18P17022 549 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 TFE3P19532 575 aaPredicted RBP17.3■□□□□ 0.36
COL6A2-205ENST00000413758 CD27P26842 260 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 CDH5P33151 784 aaPredicted RBP17.3■□□□□ 0.36
COL6A2-205ENST00000413758 GABRB2P47870 512 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 IRAK1P51617 712 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 POLR2FP61218 127 aaKnown RBP17.3■□□□□ 0.36
COL6A2-205ENST00000413758 HNRNPDQ14103 355 aaKnown RBP17.3■□□□□ 0.36
COL6A2-205ENST00000413758 ARID5BQ14865 1188 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 HLA-BQ31612 363 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 BRMS1LQ5PSV4 323 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 NAA35Q5VZE5 725 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 CXorf57Q6NSI4 855 aaKnown RBP17.3■□□□□ 0.36
COL6A2-205ENST00000413758 LRRC31Q6UY01 552 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 XYLT1Q86Y38 959 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 GPT2Q8TD30 523 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 SPAG5Q96R06 1193 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 NEUROG2Q9H2A3 272 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 TM9SF3Q9HD45 589 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 NLRC4Q9NPP4 1024 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 FANCLQ9NW38 375 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 SERGEFQ9UGK8 458 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 SNX10Q9Y5X0 201 aa17.3■□□□□ 0.36
COL6A2-205ENST00000413758 TPRP12270 2363 aaKnown RBP17.3■□□□□ 0.36
COL6A2-205ENST00000413758 GJB3O75712 270 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 RHOCP08134 193 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 VAV1P15498 845 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 CXCR3P49682 368 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 KLK7P49862 253 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 PLK1P53350 603 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 GALCP54803 685 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 CDH4P55283 916 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 FAM193AP78312 1265 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 TRIP6Q15654 476 aaKnown RBP17.29■□□□□ 0.36
COL6A2-205ENST00000413758 SLC25A52Q3SY17 297 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 NCEH1Q6PIU2 408 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 DSG4Q86SJ6 1040 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 OR14C36Q8NHC7 312 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 SLC20A1Q8WUM9 679 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 PTPRN2Q92932 1015 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 FAM129BQ96TA1 746 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 FEM1AQ9BSK4 669 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 SCNM1Q9BWG6 230 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 GANQ9H2C0 597 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 TM7SF3Q9NS93 570 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 ANO10Q9NW15 660 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 SLCO1B1Q9Y6L6 691 aa17.29■□□□□ 0.36
COL6A2-205ENST00000413758 HYAL3O43820 417 aaPredicted RBP17.28■□□□□ 0.36
COL6A2-205ENST00000413758 CNTN5O94779 1100 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 GOT1P17174 413 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
COL6A2-205ENST00000413758 C5AR1P21730 350 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 SCNN1AP37088 669 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 C21orf59P57076 290 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 KRT83P78385 493 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 BNC1Q01954 994 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 ELAVL3Q14576 367 aaKnown RBP17.28■□□□□ 0.36
COL6A2-205ENST00000413758 STX1AQ16623 288 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 KIF19Q2TAC6 998 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 OTUD1Q5VV17 481 aaPredicted RBP17.28■□□□□ 0.36
COL6A2-205ENST00000413758 CDKAL1Q5VV42 579 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 LAYNQ6UX15 382 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.28■□□□□ 0.36
COL6A2-205ENST00000413758 ZNF677Q86XU0 584 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 OR2T34Q8NGX1 318 aa17.28■□□□□ 0.36
COL6A2-205ENST00000413758 C1orf216Q8TAB5 229 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms