RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 CKAP5Q14008 2032 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 C7P10643 843 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 VAV1P15498 845 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 MAPK8P45983 427 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 SLC12A1Q13621 1099 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 CDO1Q16878 200 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 DUOXA1Q1HG43 343 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 PPM1JQ5JR12 505 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 RNF219Q5W0B1 726 aaPredicted RBP27.08■■□□□ 1.93
VEGFA-207ENST00000413642 ZNF776Q68DI1 518 aaPredicted RBP27.08■■□□□ 1.93
VEGFA-207ENST00000413642 IRF2BP2Q7Z5L9 587 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 PHF13Q86YI8 300 aaPredicted RBP27.08■■□□□ 1.93
VEGFA-207ENST00000413642 KDM1BQ8NB78 822 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 NUSAP1Q9BXS6 441 aaKnown RBP27.08■■□□□ 1.93
VEGFA-207ENST00000413642 SLC6A14Q9UN76 642 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 OR51B4Q9Y5P0 310 aa27.08■■□□□ 1.93
VEGFA-207ENST00000413642 DRGXA6NNA5 263 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 MEI4A8MW99 385 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 CLDN11O75508 207 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 ENDOD1O94919 500 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 DNTTP04053 509 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 ENGP17813 658 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 DPP6P42658 865 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 CDH4P55283 916 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 DCAF12L1Q5VU92 463 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 LUZP1Q86V48 1076 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 FOXJ1Q92949 421 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 MAGEB5Q9BZ81 275 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 C6orf106Q9H6K1 298 aaPredicted RBP27.07■■□□□ 1.92
VEGFA-207ENST00000413642 FBRSQ9HAH7 460 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 CBX8Q9HC52 389 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 TMEM9BQ9NQ34 198 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 TBC1D30Q9Y2I9 924 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 ITIH6Q6UXX5 1313 aa27.07■■□□□ 1.92
VEGFA-207ENST00000413642 A0A1B0GTH6 734 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 C2CD4BA6NLJ0 364 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 METTL12A8MUP2 240 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 SRGAP2O75044 1071 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 FERP16591 822 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 RFC1P35251 1148 aaPredicted RBP27.06■■□□□ 1.92
VEGFA-207ENST00000413642 HOXD12P35452 270 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 ARID5BQ14865 1188 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 SYCP2LQ5T4T6 812 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 TFAP2DQ7Z6R9 452 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 MMAAQ8IVH4 418 aaKnown RBP27.06■■□□□ 1.92
VEGFA-207ENST00000413642 STK40Q8N2I9 435 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 CADM4Q8NFZ8 388 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 OR2I1PQ8NGU4 316 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 PTPRN2Q92932 1015 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 C1orf74Q96LT6 269 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 FAM129BQ96TA1 746 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 CAPN10Q9HC96 672 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 PAXBP1Q9Y5B6 917 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 TNRC6BQ9UPQ9 1833 aaKnown RBP27.06■■□□□ 1.92
VEGFA-207ENST00000413642 NUP205Q92621 2012 aa27.06■■□□□ 1.92
VEGFA-207ENST00000413642 EDDM13A0A1B0GTR0 161 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 LRRC53A6NM62 1247 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 E9PAM4 449 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 SERPINF2P08697 491 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 KRT3P12035 628 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 SDC4P31431 198 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 OXCT1P55809 520 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 ZBTB16Q05516 673 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 UAP1L1Q3KQV9 507 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 FILIP1LQ4L180 1135 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 WDR45BQ5MNZ6 344 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 MON1BQ7L1V2 547 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 CEP76Q8TAP6 659 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 PSMB7Q99436 277 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 SYT11Q9BT88 431 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 GTPBP2Q9BX10 602 aaKnown RBP27.05■■□□□ 1.92
VEGFA-207ENST00000413642 MIR1-1HGQ9H1L0 117 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 PABPC3Q9H361 631 aaKnown RBP27.05■■□□□ 1.92
VEGFA-207ENST00000413642 TAS2R14Q9NYV8 317 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 SERGEFQ9UGK8 458 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 VPS28Q9UK41 221 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 SLCO1B1Q9Y6L6 691 aa27.05■■□□□ 1.92
VEGFA-207ENST00000413642 CACNA1AO00555 2505 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 TARSL2A2RTX5 802 aaKnown RBP27.04■■□□□ 1.92
VEGFA-207ENST00000413642 SNAP91O60641 907 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 RHOCP08134 193 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 SULT2A1Q06520 285 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 E4F1Q66K89 784 aaPredicted RBP27.04■■□□□ 1.92
VEGFA-207ENST00000413642 WDR59Q6PJI9 974 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 LRRC31Q6UY01 552 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 GANCQ8TET4 914 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 FRS2Q8WU20 508 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 DNASE2BQ8WZ79 361 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 HAPLN3Q96S86 360 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 SELENOOQ9BVL4 669 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 MUC3BQ9H195 1237 aa27.04■■□□□ 1.92
VEGFA-207ENST00000413642 IGLV3-10A0A075B6K4 115 aa27.03■■□□□ 1.92
VEGFA-207ENST00000413642 TCRBV5S1A1TA0A578 114 aa27.03■■□□□ 1.92
VEGFA-207ENST00000413642 MID1O15344 667 aa27.03■■□□□ 1.92
VEGFA-207ENST00000413642 CALB1P05937 261 aa27.03■■□□□ 1.92
VEGFA-207ENST00000413642 PTPN9P43378 593 aa27.03■■□□□ 1.92
VEGFA-207ENST00000413642 GFPT1Q06210 699 aaPredicted RBP27.03■■□□□ 1.92
VEGFA-207ENST00000413642 NR1I3Q14994 352 aa27.03■■□□□ 1.92
VEGFA-207ENST00000413642 CST6Q15828 149 aa27.03■■□□□ 1.92
VEGFA-207ENST00000413642 DNAAF5Q86Y56 855 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms