RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ARHGAP20Q9P2F6 1191 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 TSPAN16Q9UKR8 245 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 ERVW-1Q9UQF0 538 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 TRAF3IP3Q9Y228 551 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 FAM237AA0A1B0GTK4 181 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 ACSL4O60488 711 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 SLC11A2P49281 568 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 ERVPABLB-1P60509 514 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 DAB2P98082 770 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 ENPEPQ07075 957 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 BST2Q10589 180 aaKnown RBP9.89□□□□□ -0.83
RFFL-203ENST00000413582 OVGP1Q12889 678 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 CDH18Q13634 790 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 KMT5BQ4FZB7 885 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 FSCBQ5H9T9 825 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 PITRM1Q5JRX3 1037 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 NUGGCQ68CJ6 796 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 MMS22LQ6ZRQ5 1243 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 SIX6OS1Q8N1H7 587 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 SCML4Q8N228 414 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 TTC39CQ8N584 583 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 CCDC150Q8NCX0 1101 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 OR4C6Q8NH72 309 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 KCNE4Q8WWG9 221 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 PTPRN2Q92932 1015 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 DEPDC7Q96QD5 511 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 LRRC4Q9HBW1 653 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 TMEM8AQ9HCN3 771 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 ABCC13Q9NSE7 274 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 CYTH4Q9UIA0 394 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 SLCO3A1Q9UIG8 710 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 DMTF1Q9Y222 760 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 HPSEQ9Y251 543 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 RP1P56715 2156 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 BOD1L1Q8NFC6 3051 aa9.89□□□□□ -0.83
RFFL-203ENST00000413582 COL12A1Q99715 3063 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 TBC1D3DA0A087WVF3 549 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 TBC1D3IA0A087WXS9 549 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 TBC1D3EA0A087X179 549 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 TBC1D3KA0A087X1G2 549 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 A0A1B0GVL5 298 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 A0A1B0GVM2 712 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 TYW5A2RUC4 315 aaKnown RBP9.88□□□□□ -0.83
RFFL-203ENST00000413582 TBC1D3FA6NER0 549 aaPredicted RBP9.88□□□□□ -0.83
RFFL-203ENST00000413582 TBC1D3LB9A6J9 549 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 KLK10O43240 276 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 ACTN4O43707 911 aaKnown RBP9.88□□□□□ -0.83
RFFL-203ENST00000413582 CALUO43852 315 aaPredicted RBP9.88□□□□□ -0.83
RFFL-203ENST00000413582 SLC28A2O43868 658 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 OPA1O60313 960 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 MAGEC1O60732 1142 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 RTN2O75298 545 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 GABBR2O75899 941 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 WISP1O95388 367 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 IL1BP01584 269 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 SRPRAP08240 638 aaKnown RBP9.88□□□□□ -0.83
RFFL-203ENST00000413582 TBC1D3HP0C7X1 549 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 KRT13P13646 458 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 VAV1P15498 845 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 PFKFB1P16118 471 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 NR2F2P24468 414 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 MAT2AP31153 395 aaKnown RBP9.88□□□□□ -0.83
RFFL-203ENST00000413582 NUDT1P36639 197 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 LSSP48449 732 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 DAOAP59103 153 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 KCNC4Q03721 635 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 VAC14Q08AM6 782 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 ELAVL3Q14576 367 aaKnown RBP9.88□□□□□ -0.83
RFFL-203ENST00000413582 NFIL3Q16649 462 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 TBC1D3GQ6DHY5 549 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 TBC1D3CQ6IPX1 549 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 TRIM69Q86WT6 500 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 UNC45BQ8IWX7 931 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 FAM186BQ8IYM0 893 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 TBC1D3Q8IZP1 549 aaPredicted RBP9.88□□□□□ -0.83
RFFL-203ENST00000413582 LSMEM2Q8N112 164 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 SLC25A45Q8N413 288 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 CARNMT1Q8N4J0 409 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 KCTD13Q8WZ19 329 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 MED8Q96G25 268 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 NUCKS1Q9H1E3 243 aaKnown RBP9.88□□□□□ -0.83
RFFL-203ENST00000413582 GOLPH3LQ9H4A5 285 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 POLR1BQ9H9Y6 1135 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 CNGB3Q9NQW8 809 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 UCKL1Q9NWZ5 548 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 FAM13BQ9NYF5 915 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 CA5BQ9Y2D0 317 aa9.88□□□□□ -0.83
RFFL-203ENST00000413582 UBR5O95071 2799 aaPredicted RBP9.88□□□□□ -0.83
RFFL-203ENST00000413582 LY6G6EA0A0G2JKS1 128 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 A0A1W2PNU3 283 aaPredicted RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 O00370 1275 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 FFAR2O15552 330 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 SLC7A4O43246 635 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 PLRG1O43660 514 aaKnown RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 LZTS3O60299 673 aaPredicted RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 GADD45BO75293 160 aaPredicted RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 USP12O75317 370 aa9.87□□□□□ -0.83
RFFL-203ENST00000413582 CSO75390 466 aaKnown RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 LUC7L3O95232 432 aaKnown RBP9.87□□□□□ -0.83
RFFL-203ENST00000413582 GIMD1P0DJR0 217 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms