RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TMEM9BQ9NQ34 198 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 SLC6A14Q9UN76 642 aa10.48□□□□□ -0.73
NCKIPSD-202ENST00000413374 DNAH14Q0VDD8 3507 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 A0A1W2PP55 124 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 METTL12A8MUP2 240 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 E9PAM4 449 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 TM4SF5O14894 197 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 GIPC1O14908 333 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 MID1O15344 667 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 RNASEH1O60930 286 aaKnown RBP10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 FSBPO95073 299 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 RHOCP08134 193 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 SRPRAP08240 638 aaKnown RBP10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 KRT3P12035 628 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 FERP16591 822 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 SDC4P31431 198 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 RFC1P35251 1148 aaPredicted RBP10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 SCNN1AP37088 669 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 NNMTP40261 264 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 PSMD8P48556 350 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 LIMK1P53667 647 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 CDH4P55283 916 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 FOXK2Q01167 660 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 GFPT1Q06210 699 aaPredicted RBP10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 SLC12A1Q13621 1099 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 POM121L1PQ3SYA9 428 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 WDR45BQ5MNZ6 344 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 TTC39BQ5VTQ0 682 aaPredicted RBP10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 DAB2IPQ5VWQ8 1189 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 SLC23A3Q6PIS1 610 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 LRRC31Q6UY01 552 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 TRIM72Q6ZMU5 477 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 IRF2BP2Q7Z5L9 587 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 LUZP1Q86V48 1076 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 ZNF683Q8IZ20 524 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 ABCA7Q8IZY2 2146 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 ZCCHC9Q8N567 271 aaKnown RBP10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 CEP76Q8TAP6 659 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 PTPRN2Q92932 1015 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 ALG14Q96F25 216 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 OMDQ99983 421 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 FEM1AQ9BSK4 669 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 SPON2Q9BUD6 331 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 BTBD1Q9H0C5 482 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 RSPH9Q9H1X1 276 aaPredicted RBP10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 NEUROG2Q9H2A3 272 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 FBXL12Q9NXK8 326 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 TAS2R14Q9NYV8 317 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 SERGEFQ9UGK8 458 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 EVLQ9UI08 416 aaPredicted RBP10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 EIF2B4Q9UI10 523 aaKnown RBP10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 VPS28Q9UK41 221 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 NCKAP1Q9Y2A7 1128 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 DAAM1Q9Y4D1 1078 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 KIAA1549LQ6ZVL6 1849 aa10.47□□□□□ -0.73
NCKIPSD-202ENST00000413374 A0A0D9SEW6 157 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 EDDM13A0A1B0GTR0 161 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 TARSL2A2RTX5 802 aaKnown RBP10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 C2CD4BA6NLJ0 364 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 LRRC53A6NM62 1247 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 DRGXA6NNA5 263 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 K7ERQ8 282 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 PLK4O00444 970 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 SNAP91O60641 907 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 CLDN11O75508 207 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 RNASEH2AO75792 299 aaKnown RBP10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 ENDOD1O94919 500 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 MT-CO1P00395 513 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 IL1BP01584 269 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 SERPINF2P08697 491 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 SKILP12757 684 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 GNSP15586 552 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 OR1E1P30953 314 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 SLC8A1P32418 973 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 PLK1P53350 603 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 METAP1P53582 386 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 SULT2A1Q06520 285 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 DLG2Q15700 870 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 CST6Q15828 149 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 ASIC2Q16515 512 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 KLHL40Q2TBA0 621 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 N4BP2L1Q5TBK1 243 aaPredicted RBP10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 PEAR1Q5VY43 1037 aaPredicted RBP10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 ACAD10Q6JQN1 1059 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 SCYL2Q6P3W7 929 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 WDR59Q6PJI9 974 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 LRSAM1Q6UWE0 723 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 LINGO4Q6UY18 593 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 DRC7Q8IY82 874 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 HDDC3Q8N4P3 179 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 CADM4Q8NFZ8 388 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 OR7D4Q8NG98 312 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 BAP1Q92560 729 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 C1orf74Q96LT6 269 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 PABPC3Q9H361 631 aaKnown RBP10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 SLC25A13Q9UJS0 675 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 PAXBP1Q9Y5B6 917 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 OR51B4Q9Y5P0 310 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 SLCO1B1Q9Y6L6 691 aa10.46□□□□□ -0.73
NCKIPSD-202ENST00000413374 WDR87Q6ZQQ6 2873 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms