RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ZDHHC4Q9NPG8 344 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 ARHGEF4Q9NR80 690 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 CA10Q9NS85 328 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 CATSPERZQ9NTU4 200 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 NECAP2Q9NVZ3 263 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 NLKQ9UBE8 527 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 NEU2Q9Y3R4 380 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 LOXL2Q9Y4K0 774 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 PCDHA3Q9Y5H8 950 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 TNRC6AQ8NDV7 1962 aaKnown RBP-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 CABIN1Q9Y6J0 2220 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 KAT6BQ8WYB5 2073 aa-1.36□□□□□ -2.63
RNU4-88P-201ENST00000411220 HCFC1P51610 2035 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 LAMA4Q16363 1823 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 IGLV3-16A0A075B6K0 115 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 A0A1W2PN81 502 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 C16orf90A8MZG2 172 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 NOP56O00567 594 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 SYN3O14994 580 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 PER2O15055 1255 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 GRM6O15303 877 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 FOXP2O15409 715 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 CTNND1O60716 968 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 DIAPH2O60879 1101 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 SEC31AO94979 1220 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 LY6G6DO95868 133 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 TSHBP01222 138 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 C9P02748 559 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 GLAP06280 429 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 PRSS1P07477 247 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 PATE4P0C8F1 98 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 FAM200BP0CF97 657 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 NCLP19338 710 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 HOXC12P31275 282 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 CHRNA7P36544 502 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 FLT3P36888 993 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 FLT3LGP49771 235 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 GFRA1P56159 465 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 BRWD1-AS2P59051 145 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ABATP80404 500 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 CREB5Q02930 508 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ROM1Q03395 351 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF33BQ06732 778 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 SNTA1Q13424 505 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 RRS1Q15050 365 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 CRY1Q16526 586 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF284Q2VY69 593 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 CHRFAM7AQ494W8 412 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF311Q5JNZ3 666 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 MFSD14BQ5SR56 506 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 TMEM164Q5U3C3 297 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF613Q6PF04 617 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 MORN3Q6PF18 240 aaPredicted RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF790Q6PG37 636 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 SLC25A34Q6PIV7 304 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 Q6ZR03 302 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ARHGAP36Q6ZRI8 547 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 FAM196AQ6ZSG2 479 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 PDZD4Q76G19 769 aaPredicted RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 PCGF5Q86SE9 256 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 TMTC1Q8IUR5 882 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 GLYCTKQ8IVS8 523 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 TRIM59Q8IWR1 403 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF34Q8IZ26 560 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 MYOCDQ8IZQ8 938 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 LGI3Q8N145 548 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 PPM1NQ8N819 430 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 SPANXA2-OT1Q8N9U9 137 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 GOLM1Q8NBJ4 401 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 BVESQ8NE79 360 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNRF2Q8NHG8 242 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 MDM1Q8TC05 714 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 SECTM1Q8WVN6 248 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 SRSF12Q8WXF0 261 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ADGRG7Q96K78 797 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 LRR1Q96L50 414 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 FCRL5Q96RD9 977 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 KRT12Q99456 494 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 SYT11Q9BT88 431 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 RPP25Q9BUL9 199 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 LRRC3Q9BY71 257 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 YTHDF1Q9BYJ9 559 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ALX4Q9H161 411 aaPredicted RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 KIR3DX1Q9H7L2 352 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 WDR6Q9NNW5 1121 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 MMP25Q9NPA2 562 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 MYEF2Q9P2K5 600 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF69Q9UC07 566 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 MUTYHQ9UIF7 546 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 GJD2Q9UKL4 321 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 HDAC9Q9UKV0 1011 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 FZD10Q9ULW2 581 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 HTTP42858 3142 aa-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 UTP20O75691 2785 aaKnown RBP-1.37□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZZEF1O43149 2961 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 SALL1Q9NSC2 1324 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 TNS2Q63HR2 1409 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 AHCTF1Q8WYP5 2266 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 NBASA2RRP1 2371 aa-1.38□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms