RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CORO1AP31146 461 aaKnown RBP13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 CLDN6P56747 220 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 PTPRNQ16849 979 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 SGSM1Q2NKQ1 1148 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 ZACNQ401N2 412 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 CCDC157Q569K6 752 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 IL27RAQ6UWB1 636 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 SV2AQ7L0J3 742 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 UNC93AQ86WB7 457 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 ZNF366Q8N895 744 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 SNX19Q92543 992 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 NOX5Q96PH1 765 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 APOBEC3GQ9HC16 384 aaKnown RBP13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 ANKRD6Q9Y2G4 727 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 BZW2Q9Y6E2 419 aaKnown RBP13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 SHROOM3Q8TF72 1996 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 BTNL10A8MVZ5 291 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 ACADMP11310 421 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 ZNF132P52740 706 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 AP3M2P53677 418 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 EFEMP1Q12805 493 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 RAPGEF1Q13905 1077 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 SLC18A3Q16572 532 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 PPP1R26Q5T8A7 1209 aaPredicted RBP13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 KLHDC7AQ5VTJ3 777 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 ANKS1BQ7Z6G8 1248 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 DENND1CQ8IV53 801 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 MMGT1Q8N4V1 131 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 CDC6Q99741 560 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 CRACR2AQ9BSW2 395 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 CIPCQ9C0C6 399 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 TM9SF3Q9HD45 589 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 DAAM1Q9Y4D1 1078 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 USP3Q9Y6I4 520 aa13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 HELZ2Q9BYK8 2649 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-205ENST00000409542 A0A087WV48 116 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 H0Y8X5 98 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 NPC1O15118 1278 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 SRGAP2O75044 1071 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 ASS1P00966 412 aaKnown RBP13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 HLA-DRAP01903 254 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 ITPKBP27987 946 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 PRKCIP41743 596 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 IL9RQ01113 521 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 KLHL30Q0D2K2 578 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 GPS2Q13227 327 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 SMAD1Q15797 465 aaKnown RBP13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 EXOC3L4Q17RC7 722 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 MAP9Q49MG5 647 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 DHRS13Q6UX07 377 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 GBP6Q6ZN66 633 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 ZNF276Q8N554 614 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 OR2T3Q8NH03 318 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 GOLGA5Q8TBA6 731 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 CYB5D2Q8WUJ1 264 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 UCMAQ8WVF2 138 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 SLC35C1Q96A29 364 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 ORAI3Q9BRQ5 295 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 ST7Q9NRC1 585 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 ZNF510Q9Y2H8 683 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 KALRNO60229 2985 aa13.19□□□□□ -0.3
CHRNA1-205ENST00000409542 CBX4O00257 560 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 PDE2AO00408 941 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 TNFSF14O43557 240 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 P4HA1P13674 534 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 UCHL3P15374 230 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 PON1P27169 355 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 CHKAP35790 457 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 PSMC2P35998 433 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 AFF3P51826 1226 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 INCA1Q0VD86 236 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 CAMK2GQ13555 558 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 PRAMEF14Q5SWL7 426 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 CCDC70Q6NSX1 233 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 SERPINA13PQ6UXR4 307 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 CREG2Q8IUH2 290 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 SCUBE3Q8IX30 993 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 GALNT15Q8N3T1 639 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 PIP4K2CQ8TBX8 421 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 NDRG1Q92597 394 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 BIRC7Q96CA5 298 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 CAPZA3Q96KX2 299 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 OSBPL9Q96SU4 736 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 DUSP16Q9BY84 665 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 ZMYND15Q9H091 742 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 PNPLA8Q9NP80 782 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 SIX2Q9NPC8 291 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 RNF14Q9UBS8 474 aa13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 MUC22E2RYF6 1773 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-205ENST00000409542 SLC12A8A0AV02 714 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 EIF4E1BA6NMX2 242 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 PLK4O00444 970 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 TSPAN3O60637 253 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 C1QL1O75973 258 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 RALAP11233 206 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 CD58P19256 250 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 OAS2P29728 719 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 PIK3CAP42336 1068 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms