RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 GTSE1Q9NYZ3 720 aa12.17□□□□□ -0.46
PCNX4-204ENST00000406949 KANSL3Q9P2N6 904 aa12.17□□□□□ -0.46
PCNX4-204ENST00000406949 PIRO00625 290 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 KIF1CO43896 1103 aaKnown RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 STAU1O95793 577 aaKnown RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 GM2AP17900 193 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 AFF1P51825 1210 aaKnown RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 COPAP53621 1224 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 DNAL1Q4LDG9 190 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 PKDCCQ504Y2 493 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 ACSBG2Q5FVE4 666 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 OTOP3Q7RTS5 596 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 CCNJLQ8IV13 435 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 PABPC5Q96DU9 382 aaKnown RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 TTC36A6NLP5 189 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 PSMG1O95456 288 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 PAX7P23759 505 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 ARL1P40616 181 aaPredicted RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 LHX1P48742 406 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 CRYBB1P53674 252 aaPredicted RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 MAP2K5Q13163 448 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 GRAMD1BQ3KR37 738 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 PDPK2PQ6A1A2 396 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 TREML1Q86YW5 311 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 LINC01465Q8N7H1 131 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 OR6P1Q8NGX9 317 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 WDR60Q8WVS4 1066 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 VCXQ9H320 206 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 FAM105AQ9NUU6 356 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 PRG3Q9Y2Y8 225 aaPredicted RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 DNAJC6O75061 913 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 VAPBO95292 243 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 TGDSO95455 350 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 F2P00734 622 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 PROCP04070 461 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 AP2B1P63010 937 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 PDCD2Q16342 344 aaPredicted RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 TCHHL1Q5QJ38 904 aaPredicted RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 TMEM154Q6P9G4 183 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 MAMDC4Q6UXC1 1216 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 TFAP2DQ7Z6R9 452 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 SPATA2LQ8IUW3 424 aaPredicted RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 TOP6BLQ8N6T0 577 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 SPATA22Q8NHS9 363 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 SCG3Q8WXD2 468 aaKnown RBP12.16□□□□□ -0.46
PCNX4-204ENST00000406949 MYLPFQ96A32 169 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 MOCOSQ96EN8 888 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 C7orf26Q96N11 449 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 FICDQ9BVA6 458 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 PNPLA8Q9NP80 782 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 DLGAP2Q9P1A6 1054 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 GJD2Q9UKL4 321 aa12.16□□□□□ -0.46
PCNX4-204ENST00000406949 MSI1O43347 362 aaKnown RBP12.15□□□□□ -0.46
PCNX4-204ENST00000406949 PLIN3O60664 434 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 FBXO21O94952 628 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 ALDOAP04075 364 aaKnown RBP12.15□□□□□ -0.46
PCNX4-204ENST00000406949 UBTFL6P0CB48 400 aaPredicted RBP12.15□□□□□ -0.46
PCNX4-204ENST00000406949 PTPN3P26045 913 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 COG7P83436 770 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 KLC1Q07866 573 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 GRB14Q14449 540 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 AP1ARQ63HQ0 302 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 NAPEPLDQ6IQ20 393 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 GPRIN1Q7Z2K8 1008 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 SMARCD1Q96GM5 515 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 ELMO2Q96JJ3 720 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 CPNE1Q99829 537 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 COLEC11Q9BWP8 271 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 NUMBLQ9Y6R0 609 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 RLFQ13129 1914 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 SPANXN3Q5MJ09 141 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 RABGAP1LQ5R372 815 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 LDLRAD1Q5T700 205 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 SDHAF4Q5VUM1 108 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 LRRC74BQ6ZQY2 392 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 THEM5Q8N1Q8 247 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 FBXO27Q8NI29 283 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 PYDC1Q8WXC3 89 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 SKA1Q96BD8 255 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 FAM136AQ96C01 138 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 RTP4Q96DX8 246 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 SFMBT1Q9UHJ3 866 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 WASF2Q9Y6W5 498 aa12.15□□□□□ -0.46
PCNX4-204ENST00000406949 USP1O94782 785 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 TOMM70O94826 608 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 LRIG2O94898 1065 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 KLHL2O95198 593 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 ODC1P11926 461 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 DAOAP59103 153 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 FSCBQ5H9T9 825 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 RIPOR1Q6ZS17 1223 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 ZNF534Q76KX8 674 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 DEFB107AQ8IZN7 70 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 APBB2Q92870 758 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 PAAF1Q9BRP4 392 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 KCNK13Q9HB14 408 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 CYP4F12Q9HCS2 524 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 CRTAC1Q9NQ79 661 aa12.15□□□□□ -0.47
PCNX4-204ENST00000406949 CHST12Q9NRB3 414 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms