RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 TTC39BQ5VTQ0 682 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-204ENST00000405578 OTUD1Q5VV17 481 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-204ENST00000405578 TPGS1Q6ZTW0 290 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 NUDT18Q6ZVK8 323 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 BNIPLQ7Z465 357 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 SLFN11Q7Z7L1 901 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 PDZD3Q86UT5 571 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 PSTKQ8IV42 348 aaKnown RBP10.89□□□□□ -0.67
RPAIN-204ENST00000405578 HJURPQ8NCD3 748 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-204ENST00000405578 RIN3Q8TB24 985 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 DDI1Q8WTU0 396 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 WBP2Q969T9 261 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 C1orf74Q96LT6 269 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 XPO6Q96QU8 1125 aaKnown RBP10.89□□□□□ -0.67
RPAIN-204ENST00000405578 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 PPP1R9BQ96SB3 815 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 BBS2Q9BXC9 721 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 TRIM7Q9C029 511 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 SIK2Q9H0K1 926 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 MSRB2Q9Y3D2 182 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 ADGRG1Q9Y653 693 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 OBSL1O75147 1896 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 FREM2Q5SZK8 3169 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 CEP192Q8TEP8 1941 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 TMEM110-MUSTN1A8MSY1 372 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 NEDD8-MDP1E9PL57 170 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 PJA2O43164 708 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 ZSCAN12O43309 604 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 RHOBTB1O94844 696 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 CYP17A1P05093 508 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 TACR2P21452 398 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 MIPP30301 263 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 ZNF135P52742 658 aaPredicted RBP10.88□□□□□ -0.67
RPAIN-204ENST00000405578 HADHBP55084 474 aaKnown RBP10.88□□□□□ -0.67
RPAIN-204ENST00000405578 OGDHQ02218 1023 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 ODF2Q5BJF6 829 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 MS4A13Q5J8X5 152 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 MPP7Q5T2T1 576 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 RAP1GAP2Q684P5 730 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 RHBDF2Q6PJF5 856 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 TMEM25Q86YD3 366 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 FAM217AQ8IXS0 508 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 RPRD1AQ96P16 312 aaPredicted RBP10.88□□□□□ -0.67
RPAIN-204ENST00000405578 EPAS1Q99814 870 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 OSBPL2Q9H1P3 480 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 OSGEPQ9NPF4 335 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 HPS4Q9NQG7 708 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 DONSONQ9NYP3 566 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 MARK1Q9P0L2 795 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 PCSK1NQ9UHG2 260 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 GPSM3Q9Y4H4 160 aa10.88□□□□□ -0.67
RPAIN-204ENST00000405578 ACACAQ13085 2346 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 MAST4O15021 2626 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 PATE3B3GLJ2 98 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 CDX4O14627 284 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-204ENST00000405578 KHNYNO15037 678 aaKnown RBP10.87□□□□□ -0.67
RPAIN-204ENST00000405578 HOXC11O43248 304 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-204ENST00000405578 SPOPO43791 374 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 TSPAN3O60637 253 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 SRGAP2O75044 1071 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 ATG13O75143 517 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 LRCH4O75427 683 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 KRT7P08729 469 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 TYRP14679 529 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 HTR7P34969 479 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 GJA4P35212 333 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 EIF2DP41214 584 aaKnown RBP10.87□□□□□ -0.67
RPAIN-204ENST00000405578 OXCT1P55809 520 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 SCAPQ12770 1279 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 AUHQ13825 339 aaKnown RBP10.87□□□□□ -0.67
RPAIN-204ENST00000405578 FAM133BQ5BKY9 247 aaKnown RBP10.87□□□□□ -0.67
RPAIN-204ENST00000405578 ZFYVE27Q5T4F4 411 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 ERMARDQ5T6L9 678 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 PIK3R6Q5UE93 754 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 FSTL4Q6MZW2 842 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 PROSER1Q86XN7 944 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 SYCE1Q8N0S2 351 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 LGI2Q8N0V4 545 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 RNF10Q8N5U6 811 aaKnown RBP10.87□□□□□ -0.67
RPAIN-204ENST00000405578 CCDC26Q8TAB7 109 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 BTBD6Q96KE9 485 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 SLC2A11Q9BYW1 496 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 RETREG1Q9H6L5 497 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 CALCOCO1Q9P1Z2 691 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 STIM2Q9P246 746 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 DEC1Q9P2X7 70 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 OR12D3Q9UGF7 316 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 AP4E1Q9UPM8 1137 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
RPAIN-204ENST00000405578 REXO2Q9Y3B8 237 aaKnown RBP10.87□□□□□ -0.67
RPAIN-204ENST00000405578 HS3ST4Q9Y661 456 aa10.87□□□□□ -0.67
RPAIN-204ENST00000405578 PLXNB3Q9ULL4 1909 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 GOLGA6L7A0A1B0GV03 622 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 SPAARA0A1B0GVQ0 90 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 MACROD2A1Z1Q3 448 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 TRDMT1O14717 391 aaKnown RBP10.86□□□□□ -0.67
RPAIN-204ENST00000405578 DAPK3O43293 454 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 TBL1XO60907 577 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 RNF40O75150 1001 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 CLDN11O75508 207 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms