RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 FAM131BQ86XD5 332 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 TTLL6Q8N841 843 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 ANKLE1Q8NAG6 615 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 PPHLN1Q8NEY8 458 aaKnown RBP7.54□□□□□ -1.2
HDAC9-202ENST00000405010 PKP2Q99959 881 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 BDH2Q9BUT1 245 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 PIF1Q9H611 641 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 SCN3BQ9NY72 215 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 HACD3Q9P035 362 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 TMEM216Q9P0N5 145 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 SIRPGQ9P1W8 387 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 FNDC3AQ9Y2H6 1198 aaKnown RBP7.54□□□□□ -1.2
HDAC9-202ENST00000405010 ANGPTL3Q9Y5C1 460 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 FADS3Q9Y5Q0 445 aa7.54□□□□□ -1.2
HDAC9-202ENST00000405010 KCNK1O00180 336 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 EEF2KO00418 725 aaKnown RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 PDGFRBP09619 1106 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 UGT1A6P19224 532 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 UGT1A1P22309 533 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 UGT1A4P22310 534 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 UGT1A3P35503 534 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 UGT1A5P35504 534 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 INPP1P49441 399 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SLC7A2P52569 658 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 RBP5P82980 135 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 CSHL1Q14406 222 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 ZIK1Q3SY52 487 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SPANXN3Q5MJ09 141 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 LDLRAP1Q5SW96 308 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 FOXB2Q5VYV0 432 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 NAPEPLDQ6IQ20 393 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 KCNMB4Q86W47 210 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 BRSK2Q8IWQ3 736 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SYTL5Q8TDW5 730 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 OSCP1Q8WVF1 389 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 CCDC126Q96EE4 140 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 KIF12Q96FN5 646 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 TMEM176AQ96HP8 235 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 ZFYVE19Q96K21 471 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 PRICKLE1Q96MT3 831 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 CCDC106Q9BWC9 280 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 OCEL1Q9H607 264 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 ZFYVE28Q9HCC9 887 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 TMX2Q9Y320 296 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 C10orf71Q711Q0 1435 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 DHRS12A0PJE2 317 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SH3PXD2BA1X283 911 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 DYTNA2CJ06 578 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 PMM2O15305 246 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 MAFGO15525 162 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 DNAJA2O60884 412 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 GSNP06396 782 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SNRPB2P08579 225 aaKnown RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 CFHP08603 1231 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 CDK4P11802 303 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 CKMT2P17540 419 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 PLK1P53350 603 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 NSUN2Q08J23 767 aaKnown RBP eCLIP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 FSTL1Q12841 308 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 INSCQ1MX18 579 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SHROOM1Q2M3G4 852 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 DCAF6Q58WW2 860 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 ATF7IP2Q5U623 682 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 AGAP9Q5VTM2 703 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 BROXQ5VW32 411 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 CBR4Q8N4T8 237 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SAMD3Q8N6K7 520 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 BPIFB6Q8NFQ5 453 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 IPMKQ8NFU5 416 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 PHF21BQ96EK2 531 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 TSPAN17Q96FV3 270 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 RNF145Q96MT1 663 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 PDCD2LQ9BRP1 358 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 WRAP73Q9P2S5 460 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SNED1Q8TER0 1413 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 LRP6O75581 1613 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SF3B1O75533 1304 aaKnown RBP eCLIP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 CNTNAP4Q9C0A0 1308 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 J3QRK9 145 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 TAF4O00268 1085 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SNAP91O60641 907 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 MICAL2O94851 1124 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 TPH1P17752 444 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 ADSSP30520 456 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 PHKA2P46019 1235 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 IREB2P48200 963 aaKnown RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 ZNF143P52747 638 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 ITGA7Q13683 1181 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 CTC1Q2NKJ3 1217 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 TRAF7Q6Q0C0 670 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 GK5Q6ZS86 529 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 SCAIQ8N9R8 606 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 RSPH1Q8WYR4 309 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 DDX1Q92499 740 aaKnown RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 DACT3Q96B18 629 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-202ENST00000405010 FBXL8Q96CD0 374 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 ZDHHC15Q96MV8 337 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 USP29Q9HBJ7 922 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 XPNPEP1Q9NQW7 623 aa7.53□□□□□ -1.2
HDAC9-202ENST00000405010 PCDHB12Q9Y5F1 795 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms