RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 CNMDO75829 334 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 MT-CO1P00395 513 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 MX2P20592 715 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 FOLH1Q04609 750 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 TTLL4Q14679 1199 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 PDK3Q15120 406 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 LRRC8BQ6P9F7 803 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 CATSPER4Q7RTX7 472 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 PIGZQ86VD9 579 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 ST13P4Q8IZP2 240 aaPredicted RBP12.25□□□□□ -0.45
RBM39-206ENST00000403542 CCNYL1Q8N7R7 359 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 TMA16Q96EY4 203 aaKnown RBP12.25□□□□□ -0.45
RBM39-206ENST00000403542 NR1H4Q96RI1 486 aaPredicted RBP12.25□□□□□ -0.45
RBM39-206ENST00000403542 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 COPS7BQ9H9Q2 264 aaPredicted RBP12.25□□□□□ -0.45
RBM39-206ENST00000403542 TIMM13Q9Y5L4 95 aaPredicted RBP12.25□□□□□ -0.45
RBM39-206ENST00000403542 SSC5DA1L4H1 1573 aa12.25□□□□□ -0.45
RBM39-206ENST00000403542 POLR2AP24928 1970 aaKnown RBP12.24□□□□□ -0.45
RBM39-206ENST00000403542 hCG_2014768A0A024R1R8 64 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 DPYSL4O14531 572 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 C2P06681 752 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 GP5P40197 560 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 CDK7P50613 346 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 NAGLUP54802 743 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 C11orf91Q3C1V1 193 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 MFN1Q8IWA4 741 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 FBXW8Q8N3Y1 598 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 SLC7A14Q8TBB6 771 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 C1orf21Q9H246 121 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 TCF7L2Q9NQB0 619 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 ANLNQ9NQW6 1124 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 MKS1Q9NXB0 559 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 DDX43Q9NXZ2 648 aaKnown RBP12.24□□□□□ -0.45
RBM39-206ENST00000403542 SIP14410 1827 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 KIF3CO14782 793 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 ZBTB24O43167 697 aaPredicted RBP12.24□□□□□ -0.45
RBM39-206ENST00000403542 UQCRBP14927 111 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 XRCC1P18887 633 aaPredicted RBP12.24□□□□□ -0.45
RBM39-206ENST00000403542 THOP1P52888 689 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 ICA1LQ8NDH6 482 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 ACTRT2Q8TDY3 377 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 RCN3Q96D15 328 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 APBA2Q99767 749 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 GATA5Q9BWX5 397 aaPredicted RBP12.24□□□□□ -0.45
RBM39-206ENST00000403542 SNX25Q9H3E2 840 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 SUDS3Q9H7L9 328 aaPredicted RBP12.24□□□□□ -0.45
RBM39-206ENST00000403542 PIGVQ9NUD9 493 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 MORF4L1Q9UBU8 362 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 VANGL2Q9ULK5 521 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 ARHGAP26Q9UNA1 814 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 DOCK1Q14185 1865 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 EEF2KO00418 725 aaKnown RBP12.24□□□□□ -0.45
RBM39-206ENST00000403542 PEX1O43933 1283 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 RECQL4O94761 1208 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 ALDH1A2O94788 518 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 NR2C2P49116 596 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 BST2Q10589 180 aaKnown RBP12.24□□□□□ -0.45
RBM39-206ENST00000403542 TLR1Q15399 786 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 TBCCQ15814 346 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 GSTA3Q16772 222 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.24□□□□□ -0.45
RBM39-206ENST00000403542 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 TIFABQ6ZNK6 161 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 ARMCX2Q7L311 632 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 EDEM1Q92611 657 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 TRAPPC9Q96Q05 1148 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 GCOM2Q9BZD3 368 aaPredicted RBP12.24□□□□□ -0.45
RBM39-206ENST00000403542 ATXN3LQ9H3M9 355 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 VRTNQ9H8Y1 702 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 GPAMQ9HCL2 828 aa12.24□□□□□ -0.45
RBM39-206ENST00000403542 SF3B1O75533 1304 aaKnown RBP eCLIP12.23□□□□□ -0.459e-7■■□□□ 13.4
RBM39-206ENST00000403542 ZNF638Q14966 1978 aaKnown RBP12.23□□□□□ -0.45
RBM39-206ENST00000403542 H3BNX3 289 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 H3BRB1 525 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 CCNT2O60583 730 aaKnown RBP12.23□□□□□ -0.45
RBM39-206ENST00000403542 ZFXP17010 805 aaPredicted RBP12.23□□□□□ -0.45
RBM39-206ENST00000403542 PMLP29590 882 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 ALDH1A3P47895 512 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 MAP3K7CLP57077 242 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 MTHFD1LQ6UB35 978 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 SLC26A9Q7LBE3 791 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 RNF135Q8IUD6 432 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 URGCPQ8TCY9 931 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 KBTBD7Q8WVZ9 684 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 OLFM3Q96PB7 478 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 MED10Q9BTT4 135 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 CDH19Q9H159 772 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 SEMA6AQ9H2E6 1030 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 TUT1Q9H6E5 874 aaKnown RBP12.23□□□□□ -0.45
RBM39-206ENST00000403542 NMRAL1Q9HBL8 299 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 KIAA1257Q9ULG3 409 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 FZD10Q9ULW2 581 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 DTNAQ9Y4J8 743 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 A0A1B0GTW7 788 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 G3V2L1 256 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 I6L893 689 aaPredicted RBP12.23□□□□□ -0.45
RBM39-206ENST00000403542 PIGNO95427 931 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 ERCC2P18074 760 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 FGFR3P22607 806 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 GRK2P25098 689 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms