RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 FASTKD5Q7L8L6 764 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 KCNMB4Q86W47 210 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 ENDOVQ8N8Q3 282 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 LRRC39Q96DD0 335 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 LENG8Q96PV6 779 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 GAD1Q99259 594 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 MROH8Q9H579 483 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 WDCPQ9H6R7 721 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 IL1RL2Q9HB29 575 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 MTMR10Q9NXD2 777 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 SLC4A7Q9Y6M7 1214 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 STX16-NPEPL1H3BU86 382 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 BUD23O43709 281 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 FGF3P11487 239 aaPredicted RBP12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 YBX3P16989 372 aaKnown RBP eCLIP12.94□□□□□ -0.344e-7■■□□□ 12.1
PPP4R1-202ENST00000400555 NELFEP18615 380 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 CYP2B6P20813 491 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 GRM5P41594 1212 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 NR2C2P49116 596 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 INCA1Q0VD86 236 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 DPYSL2Q16555 572 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 FAM219BQ5XKK7 198 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 ZNF280DQ6N043 979 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 IRGCQ6NXR0 463 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 SLC41A1Q8IVJ1 513 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 CMTM5Q96DZ9 223 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 TUBGCP5Q96RT8 1024 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 LRRC40Q9H9A6 602 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 TCF7L2Q9NQB0 619 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 ZNF180Q9UJW8 692 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 CCL15-CCL14A0A0B4J2E2 113 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 MAGEA13PA6NCF6 341 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 TREHO43280 583 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 PEX1O43933 1283 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 HNRNPLP14866 589 aaKnown RBP eCLIP12.94□□□□□ -0.344e-12■■■□□ 19.2
PPP4R1-202ENST00000400555 PCLAFQ15004 111 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 CCL15Q16663 113 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 SLC26A9Q7LBE3 791 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 OR6P1Q8NGX9 317 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 URGCPQ8TCY9 931 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 NMD3Q96D46 503 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 TKTL2Q9H0I9 626 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 NMRAL1Q9HBL8 299 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 ZNF212Q9UDV6 495 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 APPL1Q9UKG1 709 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 hCG_2014768A0A024R1R8 64 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 CAPN8A6NHC0 703 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 ENDOD1O94919 500 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 PTPN1P18031 435 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 NMBRP28336 390 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 WASHC5Q12768 1159 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 MBLAC2Q68D91 279 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 SH2D5Q6ZV89 423 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 OSTM1Q86WC4 334 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 TTC39CQ8N584 583 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 PHF21BQ96EK2 531 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 LRGUKQ96M69 825 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 ZNF560Q96MR9 790 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 ECSITQ9BQ95 431 aa12.94□□□□□ -0.34
PPP4R1-202ENST00000400555 A0A0G2JLL6 359 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 MYBPHLA2RUH7 354 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 NEMP2A6NFY4 417 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 TMEM233B4DJY2 109 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 GPC4O75487 556 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 TSHRP16473 764 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 HOXA11P31270 313 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 AFF1P51825 1210 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 PRRT2Q7Z6L0 340 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 DENND6AQ8IWF6 608 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 PCDH20Q8N6Y1 951 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 PHC3Q8NDX5 983 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 PPWD1Q96BP3 646 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 ELMO2Q96JJ3 720 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 CNBD2Q96M20 576 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 NDNQ99608 321 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 ADARB2Q9NS39 739 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 SCN1AP35498 2009 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 RBBP6Q7Z6E9 1792 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 CXCR3P49682 368 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 PAPOLAP51003 745 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 ARPP19P56211 112 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 BIRC2Q13490 618 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 CYTH1Q15438 398 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 FSCBQ5H9T9 825 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 AP1ARQ63HQ0 302 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 TMEM40Q8WWA1 233 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 FSD1LQ9BXM9 530 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 ILKAPQ9H0C8 392 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 OR12D3Q9UGF7 316 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 EMCNQ9ULC0 261 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 ARHGAP26Q9UNA1 814 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 PRRC2BQ5JSZ5 2229 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 LOXHD1Q8IVV2 1947 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 ATP6AP2A0A1C7CYW4 349 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 XPOTO43592 962 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 ATP6AP2O75787 350 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 POMCP01189 267 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 CALRP27797 417 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms