RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CSE1LP55060 971 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CDH17Q12864 832 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PTPRN2Q92932 1015 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 C8orf48Q96LL4 319 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SERPINB11Q96P15 392 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SLC13A1Q9BZW2 595 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ZCWPW1Q9H0M4 648 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 STN1Q9H668 368 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 THAP1Q9NVV9 213 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SYBUQ9NX95 663 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 GGT7Q9UJ14 662 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 INPP5FQ9Y2H2 1132 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ARHGAP42A6NI28 874 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 WASH4PA8MWX3 477 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 WFS1O76024 890 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ATP6V1G2O95670 118 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ITGA2BP08514 1039 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 BGNP21810 368 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 GRK2P25098 689 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 GRIK1P39086 918 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 POLD2P49005 469 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PDE1BQ01064 536 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 KRT72Q14CN4 511 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 NOMO2Q5JPE7 1267 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MSANTD2Q6P1R3 559 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CDHR3Q6ZTQ4 885 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CLNKQ7Z7G1 428 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CCDC33Q8N5R6 958 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 NPWQ8N729 165 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 DNAAF3Q8N9W5 541 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ANKLE1Q8NAG6 615 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PXYLP1Q8TE99 480 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PTCD2Q8WV60 388 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TBC1D31Q96DN5 1066 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CFHR5Q9BXR6 569 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ELAC1Q9H777 363 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TMLHEQ9NVH6 421 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 COMMD8Q9NX08 183 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SCML2Q9UQR0 700 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PATJQ8NI35 1801 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 UGT1A9O60656 530 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SNNO75324 88 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CKBP12277 381 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SLC5A3P53794 718 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TMPRSS15P98073 1019 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SMARCB1Q12824 385 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TRIM32Q13049 653 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CCDC153Q494R4 210 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MANEALQ5VSG8 457 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ICE2Q659A1 982 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CRLF3Q8IUI8 442 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SLC43A3Q8NBI5 491 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ARMC2Q8NEN0 867 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ZSCAN18Q8TBC5 510 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 FCRL5Q96RD9 977 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 OXCT2Q9BYC2 517 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 UGT1A7Q9HAW7 530 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 UGT1A10Q9HAW8 530 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 UGT1A8Q9HAW9 530 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SOX13Q9UN79 622 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SORCS3Q9UPU3 1222 aa18.11■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MATN3O15232 486 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TIMM44O43615 452 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MPOP05164 745 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CD68P34810 354 aaPredicted RBP18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MAGEA12P43365 314 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PSEN1P49768 467 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 OCRLQ01968 901 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 BMPR2Q13873 1038 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TBCCQ15814 346 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ANKRD20A4Q4UJ75 823 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 RASSF3Q86WH2 238 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 OR52K1Q8NGK4 314 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 IL12RB2Q99665 862 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 WWP1Q9H0M0 922 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 GPBP1L1Q9HC44 474 aaPredicted RBP18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TRMT13Q9NUP7 481 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PCMTD2Q9NV79 361 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SRRDQ9UH36 339 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PTPRDP23468 1912 aa18.1■□□□□ 0.49
HLA-DQB1-204ENST00000399084 KCNU1A8MYU2 1149 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PTPN4P29074 926 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SERPINB8P50452 374 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ILF2Q12905 390 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 STX3Q13277 289 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ANO4Q32M45 955 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PLEKHG4Q58EX7 1191 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 COLGALT2Q8IYK4 626 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 NUP93Q8N1F7 819 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ATPAF2Q8N5M1 289 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CFAP61Q8NHU2 1237 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 RBBP8Q99708 897 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 GORASP1Q9BQQ3 440 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TACO1Q9BSH4 297 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 KIFC1Q9BW19 673 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TLE6Q9H808 572 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 KCNK13Q9HB14 408 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 NOD2Q9HC29 1040 aa18.09■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TBC1D13Q9NVG8 400 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms