RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 F8VZ95 297 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 LTFP02788 710 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 SERPINF2P08697 491 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 TLE2Q04725 743 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 KBTBD12Q3ZCT8 623 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 PPP1R16AQ96I34 528 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 HES2Q9Y543 173 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 CAPN6Q9Y6Q1 641 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 CCT8L1PA6NM43 557 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 MMRN1Q13201 1228 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 CYLC2Q14093 348 aaPredicted RBP14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 CYP4Z1Q86W10 505 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 ZNF557Q8N988 423 aaPredicted RBP14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 FRMD8P1Q9BZ68 369 aaPredicted RBP14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 KBTBD4Q9NVX7 518 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 GEMIN8Q9NWZ8 242 aaKnown RBP14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 EIF2S1P05198 315 aaKnown RBP14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 PSMA3P25788 255 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 FEN1P39748 380 aaKnown RBP14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 MPP3Q13368 585 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 NR6A1Q15406 480 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 CES3Q6UWW8 571 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 TRMT13Q9NUP7 481 aaKnown RBP14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 BGNP21810 368 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 AQP5P55064 265 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 ATAT1Q5SQI0 421 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 SV2AQ7L0J3 742 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 ARHGEF19Q8IW93 802 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 MTFMTQ96DP5 389 aaKnown RBP14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 DEPDC7Q96QD5 511 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 ZCCHC2Q9C0B9 1178 aaKnown RBP14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 ZNF518BQ9C0D4 1074 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 CALCAP01258 141 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 CHRNB3Q05901 458 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 KLC1Q07866 573 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 TRAF2Q12933 501 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 SERPINA13PQ6UXR4 307 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 TSHZ1Q6ZSZ6 1077 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 ZNF571Q7Z3V5 609 aaPredicted RBP14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 BNIPLQ7Z465 357 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 TRPC4APQ8TEL6 797 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 MTERF3Q96E29 417 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 PCDHB9Q9Y5E1 797 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 COPG1Q9Y678 874 aaKnown RBP14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 WDR27A2RRH5 827 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 CLK2P49760 499 aaKnown RBP14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 SLC12A3P55017 1021 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 HSDL1Q3SXM5 330 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 SNAP47Q5SQN1 464 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 FLCNQ8NFG4 579 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 ZNHIT2Q9UHR6 403 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 ZMYM5Q9UJ78 669 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 PADI3Q9ULW8 664 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 LTBP4Q8N2S1 1624 aa14.51□□□□□ -0.09
PCDHA11-201ENST00000398640 CSH1P0DML2 217 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 CSH2P0DML3 217 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 CAPSQ13938 189 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 NACC2Q96BF6 587 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 RIPOR3Q96MK2 946 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 ACOT9Q9Y305 439 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 AMPD1P23109 780 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 CCR4P51679 360 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 LUZP2Q86TE4 346 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 DENND1CQ8IV53 801 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 INPP4AQ96PE3 977 aaPredicted RBP14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 TSPAN18Q96SJ8 248 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 PCDHA2Q9Y5H9 948 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 CRYBG1Q9Y4K1 1723 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 PTENP60484 403 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 UNC93B1Q9H1C4 597 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 PLCH1Q4KWH8 1693 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 ATRNL1Q5VV63 1379 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 OR56A5P0C7T3 313 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 THRAP10827 490 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 NPAS4Q8IUM7 802 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 CCNJLQ8IV13 435 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 SUGP1Q8IWZ8 645 aaKnown RBP14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 REXO1L1PQ8IX06 675 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 C11orf84Q9BUA3 381 aaPredicted RBP14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 ROGDIQ9GZN7 287 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 ABCG4Q9H172 646 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 H0YC42 278 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 PROSCO94903 275 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 GJB6O95452 261 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 FGRP09769 529 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 HSMCR30P0CW71 290 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 PYGMP11217 842 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 ITGB5P18084 799 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 EML3Q32P44 896 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 WSCD1Q658N2 575 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 CYP20A1Q6UW02 462 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 SRLQ86TD4 932 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 NAT16Q8N8M0 369 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 GPR152Q8TDT2 470 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 CATSPER2Q96P56 530 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 ACO2Q99798 780 aaKnown RBP14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 TTPALQ9BTX7 342 aa14.5□□□□□ -0.09
PCDHA11-201ENST00000398640 TKTL2Q9H0I9 626 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms