RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 QPCTQ16769 361 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 EIF1ADQ8N9N8 165 aaKnown RBP15.54■□□□□ 0.08
MCF2L-205ENST00000397017 TEKT4Q8WW24 435 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 MANSC1Q9H8J5 431 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 EOMESO95936 686 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 MT-CO1P00395 513 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 OXCT1P55809 520 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 ZBTB6Q15916 424 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 LINGO4Q6UY18 593 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.54■□□□□ 0.08
MCF2L-205ENST00000397017 CMC1Q7Z7K0 106 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 LRRC43Q8N309 656 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.54■□□□□ 0.08
MCF2L-205ENST00000397017 MFSD3Q96ES6 412 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 SUSD3Q96L08 255 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 MECRQ9BV79 373 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 RRN3Q9NYV6 651 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 CFLARO15519 480 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 CSF2RAP15509 400 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 KDSRQ06136 332 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 CTBP1Q13363 440 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 MPP3Q13368 585 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 RPS6KA2Q15349 733 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 AZIN2Q96A70 460 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 CYP2S1Q96SQ9 504 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 MRPL17Q9NRX2 175 aaKnown RBP15.54■□□□□ 0.08
MCF2L-205ENST00000397017 ZFP69BQ9UJL9 534 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 KCNQ1P51787 676 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 POM121L1PQ3SYA9 428 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 KIAA0319Q5VV43 1072 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 WDR75Q8IWA0 830 aaKnown RBP15.53■□□□□ 0.08
MCF2L-205ENST00000397017 CHRAC1Q9NRG0 131 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 CRYL1Q9Y2S2 319 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 ESRRAP11474 423 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-205ENST00000397017 CHRNA4P43681 627 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 PLK1P53350 603 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 SLC10A2Q12908 348 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-205ENST00000397017 STX3Q13277 289 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 PARP6Q2NL67 630 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 CLLU1OSQ5K130 101 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 HECTD3Q5T447 861 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 PLPP4Q5VZY2 271 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 NCBP2-AS2Q69YL0 99 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 SRLQ86TD4 932 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 CAB39LQ9H9S4 337 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 PCDHB8Q9UN66 801 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-205ENST00000397017 ZRANB3Q5FWF4 1079 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 ZNF470Q6ECI4 717 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 UNC5AQ6ZN44 842 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 PSTKQ8IV42 348 aaKnown RBP15.53■□□□□ 0.08
MCF2L-205ENST00000397017 TTC8Q8TAM2 541 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 SRPK1Q96SB4 655 aaKnown RBP15.53■□□□□ 0.08
MCF2L-205ENST00000397017 SH3GL2Q99962 352 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 NMUR1Q9HB89 426 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 SLC17A7Q9P2U7 560 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 FBXW11Q9UKB1 542 aa15.53■□□□□ 0.08
MCF2L-205ENST00000397017 CLGNO14967 610 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 CHADO15335 359 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 SPAG6O75602 509 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 RTN3O95197 1032 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-205ENST00000397017 CNGA3Q16281 694 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 DPYSL2Q16555 572 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 LDB1Q86U70 411 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-205ENST00000397017 PRPF39Q86UA1 669 aaKnown RBP15.52■□□□□ 0.08
MCF2L-205ENST00000397017 LPCAT1Q8NF37 534 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 CFAP61Q8NHU2 1237 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 SEMA3CQ99985 751 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 AAASQ9NRG9 546 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 NDFIP2Q9NV92 336 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 AAR2Q9Y312 384 aaKnown RBP15.52■□□□□ 0.08
MCF2L-205ENST00000397017 LOC100653049A0A140TA62 436 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 E5RI56 91 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 DNAJC6O75061 913 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 KRT34O76011 436 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 GABRR2P28476 465 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 RPS24P62847 133 aaKnown RBP15.52■□□□□ 0.08
MCF2L-205ENST00000397017 ARHGAP36Q6ZRI8 547 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 KCNMB4Q86W47 210 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 OR7D4Q8NG98 312 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 STMN2Q93045 179 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 TMA16Q96EY4 203 aaKnown RBP15.52■□□□□ 0.08
MCF2L-205ENST00000397017 GPR63Q9BZJ6 419 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 CIPCQ9C0C6 399 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 IGFLR1Q9H665 355 aa15.52■□□□□ 0.08
MCF2L-205ENST00000397017 FAM155AB1AL88 458 aaPredicted RBP15.52■□□□□ 0.07
MCF2L-205ENST00000397017 E9PAM4 449 aa15.52■□□□□ 0.07
MCF2L-205ENST00000397017 PAPOLAP51003 745 aaKnown RBP15.52■□□□□ 0.07
MCF2L-205ENST00000397017 GEMP55040 296 aa15.52■□□□□ 0.07
MCF2L-205ENST00000397017 CDH17Q12864 832 aa15.52■□□□□ 0.07
MCF2L-205ENST00000397017 RNF19BQ6ZMZ0 732 aa15.52■□□□□ 0.07
MCF2L-205ENST00000397017 DDX53Q86TM3 631 aaKnown RBP15.52■□□□□ 0.07
MCF2L-205ENST00000397017 UBR7Q8N806 425 aa15.52■□□□□ 0.07
MCF2L-205ENST00000397017 E2F7Q96AV8 911 aa15.52■□□□□ 0.07
MCF2L-205ENST00000397017 SLC24A2Q9UI40 661 aa15.52■□□□□ 0.07
MCF2L-205ENST00000397017 NME7Q9Y5B8 376 aa15.52■□□□□ 0.07
MCF2L-205ENST00000397017 SMAPO00193 183 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 NCAM2O15394 837 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 CXCL14O95715 111 aa15.51■□□□□ 0.07
MCF2L-205ENST00000397017 CTNNB1P35222 781 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms