RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 WDR93Q6P2C0 686 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 SETD3Q86TU7 594 aaPredicted RBP15.81■□□□□ 0.12
VAMP1-202ENST00000396308 BBS7Q8IWZ6 715 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 CFAP52Q8N1V2 620 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 NPWQ8N729 165 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 FAM71DQ8N9W8 422 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 ADAMTS19Q8TE59 1207 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 DDI1Q8WTU0 396 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 HTR3CQ8WXA8 447 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 FGF13Q92913 245 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 SMARCD2Q92925 531 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 SNF8Q96H20 258 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 PRICKLE1Q96MT3 831 aaPredicted RBP15.81■□□□□ 0.12
VAMP1-202ENST00000396308 TRIM31Q9BZY9 425 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 DPH5Q9H2P9 285 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 SP110Q9HB58 689 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 THG1LQ9NWX6 298 aaKnown RBP15.81■□□□□ 0.12
VAMP1-202ENST00000396308 SEPT10Q9P0V9 454 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 PAK5Q9P286 719 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 CDH7Q9ULB5 785 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 HPCAL4Q9UM19 191 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 LAMA3Q16787 3333 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 CHD9Q3L8U1 2897 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 H0Y626 953 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 DYNC1I1O14576 645 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 TBX10O75333 385 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 RBL1P28749 1068 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 TNFRSF8P28908 595 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 IFNAR2P48551 515 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 VPS41P49754 854 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 RPS24P62847 133 aaKnown RBP15.8■□□□□ 0.12
VAMP1-202ENST00000396308 MRPS25P82663 173 aaKnown RBP15.8■□□□□ 0.12
VAMP1-202ENST00000396308 CAV1Q03135 178 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 SLC10A2Q12908 348 aaPredicted RBP15.8■□□□□ 0.12
VAMP1-202ENST00000396308 CBX2Q14781 532 aaPredicted RBP15.8■□□□□ 0.12
VAMP1-202ENST00000396308 P3H1Q32P28 736 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 ALFQ53S48 1182 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 MPP7Q5T2T1 576 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 ZNF783Q6ZMS7 281 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 ARHGEF18Q6ZSZ5 1173 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 PCGF5Q86SE9 256 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 CIR1Q86X95 450 aaPredicted RBP15.8■□□□□ 0.12
VAMP1-202ENST00000396308 CCDC13Q8IYE1 715 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 CARNMT1Q8N4J0 409 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 EIF1ADQ8N9N8 165 aaKnown RBP15.8■□□□□ 0.12
VAMP1-202ENST00000396308 IFT81Q8WYA0 676 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.8■□□□□ 0.12
VAMP1-202ENST00000396308 WBP2Q969T9 261 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 LRCH3Q96II8 777 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 VAT1Q99536 393 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 PARD6BQ9BYG5 372 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 MAGEH1Q9H213 219 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 OBP2AQ9NY56 170 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 MTRF1LQ9UGC7 380 aaKnown RBP15.8■□□□□ 0.12
VAMP1-202ENST00000396308 DMGDHQ9UI17 866 aaKnown RBP15.8■□□□□ 0.12
VAMP1-202ENST00000396308 CCL26Q9Y258 94 aa15.8■□□□□ 0.12
VAMP1-202ENST00000396308 NUP205Q92621 2012 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 RASA4BC9J798 803 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 RNF103O00237 685 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 TRDMT1O14717 391 aaKnown RBP15.79■□□□□ 0.12
VAMP1-202ENST00000396308 SCAMP3O14828 347 aaKnown RBP15.79■□□□□ 0.12
VAMP1-202ENST00000396308 RASA4O43374 803 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 OPHN1O60890 802 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 CNTN5O94779 1100 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 LUC7L3O95232 432 aaKnown RBP15.79■□□□□ 0.12
VAMP1-202ENST00000396308 CCNCP24863 283 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 GBP2P32456 591 aaPredicted RBP15.79■□□□□ 0.12
VAMP1-202ENST00000396308 DRG2P55039 364 aaKnown RBP15.79■□□□□ 0.12
VAMP1-202ENST00000396308 GPS1Q13098 491 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 BRD3Q15059 726 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 TRIP13Q15645 432 aaPredicted RBP15.79■□□□□ 0.12
VAMP1-202ENST00000396308 CTC1Q2NKJ3 1217 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 ITPRIPL1Q6GPH6 555 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 MFN1Q8IWA4 741 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 BPIFB1Q8TDL5 484 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 RTP4Q96DX8 246 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 ZSWIM3Q96MP5 696 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 FAM161BQ96MY7 647 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 ASB16Q96NS5 453 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 LGMNQ99538 433 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 SLC39A8Q9C0K1 460 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 KLC2Q9H0B6 622 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 MUC3BQ9H195 1237 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 GDF3Q9NR23 364 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 CLEC1BQ9P126 229 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 WHRNQ9P202 907 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 CD207Q9UJ71 328 aa15.79■□□□□ 0.12
VAMP1-202ENST00000396308 KIF26AQ9ULI4 1882 aaPredicted RBP15.78■□□□□ 0.12
VAMP1-202ENST00000396308 ILVBLA1L0T0 632 aa15.78■□□□□ 0.12
VAMP1-202ENST00000396308 NRG2O14511 850 aaPredicted RBP15.78■□□□□ 0.12
VAMP1-202ENST00000396308 GREM1O60565 184 aa15.78■□□□□ 0.12
VAMP1-202ENST00000396308 ITIH2P19823 946 aa15.78■□□□□ 0.12
VAMP1-202ENST00000396308 PAPOLAP51003 745 aaKnown RBP15.78■□□□□ 0.12
VAMP1-202ENST00000396308 IRAK1P51617 712 aa15.78■□□□□ 0.12
VAMP1-202ENST00000396308 ZXDBP98169 803 aa15.78■□□□□ 0.12
VAMP1-202ENST00000396308 GNA12Q03113 381 aa15.78■□□□□ 0.12
VAMP1-202ENST00000396308 NAA30Q147X3 362 aaPredicted RBP15.78■□□□□ 0.12
VAMP1-202ENST00000396308 FAM78AQ5JUQ0 283 aa15.78■□□□□ 0.12
VAMP1-202ENST00000396308 AFMIDQ63HM1 303 aa15.78■□□□□ 0.12
VAMP1-202ENST00000396308 DUPD1Q68J44 220 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms