RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 MRPL1Q9BYD6 325 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 LRRC40Q9H9A6 602 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 SYBUQ9NX95 663 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 GGA3Q9NZ52 723 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 AK5Q9Y6K8 562 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 PTPRFP10586 1907 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 A0A0J9YVX5 310 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 C19orf81C9J6K1 198 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 LGR5O75473 907 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 TRMUO75648 421 aaKnown RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 CYP2C8P10632 490 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 ZNF23P17027 643 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 TCF7P36402 384 aaPredicted RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 PSMD8P48556 350 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 PRKAA1Q13131 559 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 TMEM132AQ24JP5 1023 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 SEL1L3Q68CR1 1132 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 NAPRTQ6XQN6 538 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 SLC26A9Q7LBE3 791 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 CHERPQ8IWX8 916 aaKnown RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 LILRA2Q8N149 483 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 TMEM102Q8N9M5 508 aaPredicted RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 NLRP7Q8WX94 980 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 GATA5Q9BWX5 397 aaPredicted RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 IL22Q9GZX6 179 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 DRC3Q9H069 523 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 EFCAB1Q9HAE3 211 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 PRMT7Q9NVM4 692 aaPredicted RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 OXSMQ9NWU1 459 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 ANKRD6Q9Y2G4 727 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 CEPT1Q9Y6K0 416 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 INO80B-WBP1J3KQ70 363 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 PAPSS1O43252 624 aaPredicted RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 TIMM44O43615 452 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 PFDN1O60925 122 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 STAG3L1P0CL83 205 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 PSMC3P17980 439 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 CDH2P19022 906 aaPredicted RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 EDNRBP24530 442 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 SERPINB5P36952 375 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 RPL14P50914 215 aaKnown RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 RBP5P82980 135 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 MBTD1Q05BQ5 628 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 CEACAM7Q14002 265 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 FAM182AQ5T1J6 154 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 PMF1Q6P1K2 205 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 ERI1Q8IV48 349 aaKnown RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 BHLHE22Q8NFJ8 381 aaPredicted RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 SLC35F5Q8WV83 523 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 BIRC8Q96P09 236 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 COPS7BQ9H9Q2 264 aaPredicted RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 WDR41Q9HAD4 459 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 MYOZ2Q9NPC6 264 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 MAN1C1Q9NR34 630 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 UTP6Q9NYH9 597 aaKnown RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 RPS6KL1Q9Y6S9 549 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 A0A096LPK6 155 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 ZBTB42B2RXF5 422 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 RNF103O00237 685 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 CAPN15O75808 1086 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 SLC5A2P31639 672 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 ARL4AP40617 200 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 ALDH3B2P48448 385 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 RGS7P49802 495 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 EMP3P54852 163 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 CRADDP78560 199 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 POU5F1BQ06416 359 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 LSM12Q3MHD2 195 aaKnown RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 IRAK1BP1Q5VVH5 260 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 ZYG11AQ6WRX3 759 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 CATSPERGQ6ZRH7 1159 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 KRT27Q7Z3Y8 459 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 CMC1Q7Z7K0 106 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 TMEM192Q8IY95 271 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 DNAJC1Q96KC8 554 aaKnown RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 PKP2Q99959 881 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 OXCT2Q9BYC2 517 aaPredicted RBP8.88□□□□□ -0.99
BDNF-204ENST00000395980 NMRAL1Q9HBL8 299 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 EPS15L1Q9UBC2 864 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 APPL1Q9UKG1 709 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 AFG3L2Q9Y4W6 797 aa8.88□□□□□ -0.99
BDNF-204ENST00000395980 PIK3R2O00459 728 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 TRIM38O00635 465 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 ACOT8O14734 319 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 B4GALT5O43286 388 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 ATP6V1B1P15313 513 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 CDK9P50750 372 aaKnown RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 TUBA4AP68366 448 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 NSUN2Q08J23 767 aaKnown RBP eCLIP8.87□□□□□ -0.99
BDNF-204ENST00000395980 TMEM132DQ14C87 1099 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 PDK1Q15118 436 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 DCAF15Q66K64 600 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 DHRS4L2Q6PKH6 230 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 STRADAQ7RTN6 431 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 PLPPR4Q7Z2D5 763 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 CROCCP3Q8IVE0 287 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 PLD6Q8N2A8 252 aaKnown RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 LRRC71Q8N4P6 559 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 LRRN4Q8WUT4 740 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 RCN3Q96D15 328 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms