RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TATDN2Q93075 761 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MKL1Q969V6 931 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 HGH1Q9BTY7 390 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 NFKBIL1Q9UBC1 381 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 OPTCQ9UBM4 332 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CORO2BQ9UQ03 480 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SEC22BO75396 215 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ENDOD1O94919 500 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CYP3A4P08684 503 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PIK3R1P27986 724 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PSMC6P62333 389 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PLIN5Q00G26 463 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SLC45A4Q5BKX6 768 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TYW3Q6IPR3 259 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 LRRC49Q8IUZ0 686 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ZCCHC9Q8N567 271 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 WDR36Q8NI36 951 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FAM45AQ8TCE6 357 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 UBE2E3Q969T4 207 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MCCC1Q96RQ3 725 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TBL1YQ9BQ87 522 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 APOL2Q9BQE5 337 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ADI1Q9BV57 179 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TRPV2Q9Y5S1 764 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 OPLAHO14841 1288 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 CCNT2O60583 730 aaKnown RBP5.55□□□□□ -1.52
VPS13C-204ENST00000395898 DLGAP3O95886 979 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 YBX3P16989 372 aaKnown RBP eCLIP5.55□□□□□ -1.526e-6■■■□□ 15.3
VPS13C-204ENST00000395898 AKAP5P24588 427 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 RPL3P39023 403 aaKnown RBP5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ALDH9A1P49189 494 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 SNRPD1P62314 119 aaKnown RBP5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ADHFE1Q8IWW8 467 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 STAG3L4Q8TBR4 150 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 SPPL2AQ8TCT8 520 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 CSGALNACT1Q8TDX6 532 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 TMEM39AQ9NV64 488 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ATAD3AQ9NVI7 634 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ADPRHL2Q9NX46 363 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 DNMT3LQ9UJW3 386 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 PARP4Q9UKK3 1724 aaKnown RBP5.55□□□□□ -1.52
VPS13C-204ENST00000395898 A0A096LPK6 155 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 KCNH1O95259 989 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 MED26O95402 600 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 NPR3P17342 541 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 POLR2EP19388 210 aaKnown RBP5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ELK3P41970 407 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 IKBKEQ14164 716 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 BTG3Q14201 252 aaPredicted RBP5.55□□□□□ -1.52
VPS13C-204ENST00000395898 TCEA2Q15560 299 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 BHLHB9Q6PI77 547 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF662Q6ZS27 426 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 UNC93AQ86WB7 457 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 GPSM1Q86YR5 675 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ETNPPLQ8TBG4 499 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 RNFT2Q96EX2 444 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 TMEM216Q9P0N5 145 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 PRKAG3Q9UGI9 489 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 TSC22D4Q9Y3Q8 395 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 DYTNA2CJ06 578 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 LACTBL1A8MY62 500 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 INPP4BO15327 924 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 EPN2O95208 641 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 WASHC2DQ5SRD0 308 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 KCNT2Q6UVM3 1135 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 MACC1Q6ZN28 852 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 CCDC149Q6ZUS6 474 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 FAM136AQ96C01 138 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ATP13A1Q9HD20 1204 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 GLI1P08151 1106 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ENO2P09104 434 aaPredicted RBP5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF24P17028 368 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 POU1F1P28069 291 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 RFX3P48380 749 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ITGA1P56199 1179 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ST3GAL1Q11201 340 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 CNGA2Q16280 664 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 USP7Q93009 1102 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 SLC39A8Q9C0K1 460 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 GNPTGQ9UJJ9 305 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS13C-204ENST00000395898 BGNP21810 368 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 MGAT1P26572 445 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 SHMT1P34896 483 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 TTPAP49638 278 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 FAM187BQ17R55 369 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 PPM1LQ5SGD2 360 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 RIOX2Q8IUF8 465 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 KAZALD1Q96I82 304 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 BBS4Q96RK4 519 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 SLITRK2Q9H156 845 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 HPS4Q9NQG7 708 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 SNX6Q9UNH7 406 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ENTPD4Q9Y227 616 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 CRYL1Q9Y2S2 319 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 BCL9O00512 1426 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 LTFP02788 710 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 FAM58BPP0C7Q3 252 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 GRIK3Q13003 919 aa5.55□□□□□ -1.52
VPS13C-204ENST00000395898 ALG11Q2TAA5 492 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms